Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BKM19_RS04050 Genome accession   NZ_CP026558
Coordinates   684657..685067 (+) Length   136 a.a.
NCBI ID   WP_002551738.1    Uniprot ID   A0AAT9SFQ2
Organism   Pseudomonas amygdali pv. morsprunorum strain R15244     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 679657..690067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKM19_RS04020 (BKM19_004015) - 679678..680682 (-) 1005 WP_005731057.1 aspartate carbamoyltransferase catalytic subunit -
  BKM19_RS04025 (BKM19_004020) pyrR 680695..681207 (-) 513 WP_002551733.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  BKM19_RS04030 (BKM19_004025) ruvX 681306..681746 (-) 441 WP_060402789.1 Holliday junction resolvase RuvX -
  BKM19_RS04035 (BKM19_004030) - 681746..682318 (-) 573 WP_002551735.1 YqgE/AlgH family protein -
  BKM19_RS04040 (BKM19_004035) - 682394..683296 (-) 903 WP_031599039.1 energy transducer TonB -
  BKM19_RS04045 (BKM19_004040) gshB 683453..684412 (-) 960 WP_044322892.1 glutathione synthase -
  BKM19_RS04050 (BKM19_004045) pilG 684657..685067 (+) 411 WP_002551738.1 twitching motility response regulator PilG Regulator
  BKM19_RS04055 (BKM19_004050) pilH 685114..685479 (+) 366 WP_002551739.1 twitching motility response regulator PilH -
  BKM19_RS04060 (BKM19_004055) - 685494..686033 (+) 540 WP_060402788.1 chemotaxis protein CheW -
  BKM19_RS04065 (BKM19_004060) - 686082..688124 (+) 2043 WP_060402787.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 14943.42 Da        Isoelectric Point: 8.5283

>NTDB_id=270235 BKM19_RS04050 WP_002551738.1 684657..685067(+) (pilG) [Pseudomonas amygdali pv. morsprunorum strain R15244]
MEQHASALKVMVIDDSKTIRRTAETLLKNAGCEVITAIDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNRAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLSAIKAHVPGFVAAEQHIS

Nucleotide


Download         Length: 411 bp        

>NTDB_id=270235 BKM19_RS04050 WP_002551738.1 684657..685067(+) (pilG) [Pseudomonas amygdali pv. morsprunorum strain R15244]
ATGGAACAACACGCCTCCGCCTTGAAAGTCATGGTCATCGATGACTCGAAGACCATTCGCCGCACCGCCGAAACACTGCT
TAAAAACGCAGGTTGTGAAGTCATCACTGCGATAGACGGTTTCGACGCGCTGGCCAAGATTGCCGATAACCACCCACGAA
TCATATTCGTAGATATCATGATGCCGCGTCTGGACGGTTATCAGACGTGTGCGCTGATCAAGAACAACCGCGCATTCAAG
TCCACGCCGGTCATCATGCTGTCCTCCAAGGATGGTCTGTTCGACAAGGCCAAGGGGCGGATTGTCGGTTCCGATCAGTT
TTTGACAAAGCCTTTCAGCAAGGAAGAACTGCTCAGCGCGATCAAGGCTCATGTGCCGGGCTTCGTTGCAGCAGAACAAC
ACATATCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

91.912

0.691

Multiple sequence alignment