Detailed information NTG0270197

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: CH597_RS06950
• Genome accession: NZ_CP031688
• Coordinates: 1368295..1369716 (-)
• Length: 473 a.a.
• NCBI ID: WP_005687198.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain P636-8296
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1363295..1374716

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CH597_RS06930 (CH597_06925)	pstA	1363946..1364794 (+)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-
CH597_RS06935 (CH597_06930)	pstB	1364804..1365571 (+)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
CH597_RS06940 (CH597_06935)	phoB	1365668..1366363 (+)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
CH597_RS06945 (CH597_06940)	phoR	1366360..1367637 (+)	1278	WP_005653955.1	phosphate regulon sensor histidine kinase PhoR	-
CH597_RS06950 (CH597_06945)	sbcB	1368295..1369716 (-)	1422	WP_005687198.1	exodeoxyribonuclease I	Machinery gene
CH597_RS06955 (CH597_06950)	-	1369729..1370604 (-)	876	WP_011272627.1	hypothetical protein	-
CH597_RS06960 (CH597_06955)	-	1370608..1371516 (-)	909	WP_011272628.1	DUF5655 domain-containing protein	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54323.71 Da
• Isoelectric Point: 5.7258

>NTDB_id=270197 CH597_RS06950 WP_005687198.1 1368295..1369716(-) (sbcB) [Haemophilus influenzae strain P636-8296]
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSKLEERGVSSVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=270197 CH597_RS06950 WP_005687198.1 1368295..1369716(-) (sbcB) [Haemophilus influenzae strain P636-8296]
ATGGCAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGCCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACGCCTCAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGAATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTAAATTAGAAGAAAGAGGAGTTTCATCTG
TTCCGTTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAAATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTATTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAACGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	55.15	98.52	0.543