Detailed information NTG0270132

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: CH602_RS06685
• Genome accession: NZ_CP031687
• Coordinates: 1365739..1367160 (+)
• Length: 473 a.a.
• NCBI ID: WP_042594029.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain P641-4342
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1360739..1372160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CH602_RS06675 (CH602_06675)	-	1363939..1364847 (+)	909	WP_005650618.1	DUF5655 domain-containing protein	-
CH602_RS06680 (CH602_06680)	-	1364851..1365726 (+)	876	WP_011272627.1	hypothetical protein	-
CH602_RS06685 (CH602_06685)	sbcB	1365739..1367160 (+)	1422	WP_042594029.1	exodeoxyribonuclease I	Machinery gene
CH602_RS06690 (CH602_06690)	phoR	1367818..1369095 (-)	1278	WP_005653955.1	phosphate regulon sensor histidine kinase PhoR	-
CH602_RS06695 (CH602_06695)	phoB	1369092..1369787 (-)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
CH602_RS06700 (CH602_06700)	pstB	1369884..1370651 (-)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
CH602_RS06705 (CH602_06705)	pstA	1370661..1371509 (-)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54353.74 Da
• Isoelectric Point: 5.7258

>NTDB_id=270132 CH602_RS06685 WP_042594029.1 1365739..1367160(+) (sbcB) [Haemophilus influenzae strain P641-4342]
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNTLIVCDLTGDIDNLLAKSADELRTDLYTKKSKLEERGVSSVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=270132 CH602_RS06685 WP_042594029.1 1365739..1367160(+) (sbcB) [Haemophilus influenzae strain P641-4342]
ATGGCAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGCCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACGCCTCAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGGATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATACACTCATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTAAATTAGAAGAAAGAGGAGTTTCATCTG
TTCCGTTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAAATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTATTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAACGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease (RNase_T) (9-188)

• Exonuclease C-terminal (ExoI_SH3) (208-468)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	54.936	98.52	0.541