Detailed information NTG0269944

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: CH613_RS06535
• Genome accession: NZ_CP031684
• Coordinates: 1353559..1354980 (+)
• Length: 473 a.a.
• NCBI ID: WP_011272626.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain P652-8881
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1348559..1359980

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CH613_RS06525 (CH613_06525)	-	1351760..1352668 (+)	909	WP_005687201.1	DUF5655 domain-containing protein	-
CH613_RS06530 (CH613_06530)	-	1352671..1353546 (+)	876	WP_011961929.1	hypothetical protein	-
CH613_RS06535 (CH613_06535)	sbcB	1353559..1354980 (+)	1422	WP_011272626.1	exodeoxyribonuclease I	Machinery gene
CH613_RS06540 (CH613_06540)	phoR	1355669..1356946 (-)	1278	WP_011961930.1	phosphate regulon sensor histidine kinase PhoR	-
CH613_RS06545 (CH613_06545)	phoB	1356943..1357638 (-)	696	WP_006996031.1	phosphate regulon transcriptional regulator PhoB	-
CH613_RS06550 (CH613_06550)	pstB	1357735..1358502 (-)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
CH613_RS06555 (CH613_06555)	pstA	1358512..1359360 (-)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54309.60 Da
• Isoelectric Point: 5.4095

>NTDB_id=269944 CH613_RS06535 WP_011272626.1 1353559..1354980(+) (sbcB) [Haemophilus influenzae strain P652-8881]
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLSWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSELEERGVSSVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWQKYRQNKLEKSAVEFQSGLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=269944 CH613_RS06535 WP_011272626.1 1353559..1354980(+) (sbcB) [Haemophilus influenzae strain P652-8881]
ATGGCAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGTCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCGGTAATGGTAACAGGAATTACACCACAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTCATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTACGAGCTTGTTATGCCCTGCGTCCAGAAGGAATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAACCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGAGCGATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTATCTTGGCATCCGACAAATCAAAATGCATTAATTGTGTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTGAATTAGAAGAAAGAGGAGTTTCATCCG
TTCCGTTAAAACTTGTGCATATTAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAAATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTGTTCCATTATCGTGCTCGCCACTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGCAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTCAATCAGGTTTACAACGTTTAGCCGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease (RNase_T) (9-188)

• Exonuclease C-terminal (ExoI_SH3) (208-468)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	54.936	98.52	0.541