Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   CH624_RS02725 Genome accession   NZ_CP031682
Coordinates   541424..541927 (-) Length   167 a.a.
NCBI ID   WP_005659750.1    Uniprot ID   -
Organism   Haemophilus influenzae strain P665-7858     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 536424..546927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CH624_RS02700 (CH624_02700) - 536556..537608 (+) 1053 WP_042611148.1 extracellular solute-binding protein -
  CH624_RS02705 (CH624_02705) hslU 537678..539012 (-) 1335 WP_038439403.1 HslU--HslV peptidase ATPase subunit -
  CH624_RS02710 (CH624_02710) hslV 539023..539550 (-) 528 WP_005656555.1 ATP-dependent protease subunit HslV -
  CH624_RS02715 (CH624_02715) aphA 539772..540479 (+) 708 WP_005649426.1 acid phosphatase AphA -
  CH624_RS09865 - 540526..540821 (-) 296 Protein_505 transposase -
  CH624_RS09870 - 540922..541119 (-) 198 WP_080358435.1 helix-turn-helix domain-containing protein -
  CH624_RS09875 - 541116..541322 (-) 207 WP_080281353.1 helix-turn-helix domain-containing protein -
  CH624_RS02725 (CH624_02725) luxS 541424..541927 (-) 504 WP_005659750.1 S-ribosylhomocysteine lyase Regulator
  CH624_RS02730 (CH624_02730) - 542257..542730 (-) 474 WP_116937989.1 YqaA family protein -
  CH624_RS02735 (CH624_02735) - 542730..543332 (-) 603 WP_005652027.1 beta-phosphoglucomutase family hydrolase -
  CH624_RS02740 (CH624_02740) - 543448..543825 (+) 378 WP_005652029.1 PRD domain-containing protein -
  CH624_RS02745 (CH624_02745) rsmG 543963..544574 (+) 612 WP_005652031.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  CH624_RS02750 (CH624_02750) - 544700..545074 (+) 375 WP_042610819.1 ATP synthase subunit I -
  CH624_RS02755 (CH624_02755) atpB 545111..545899 (+) 789 WP_005629251.1 F0F1 ATP synthase subunit A -
  CH624_RS02760 (CH624_02760) atpE 545955..546209 (+) 255 WP_005652035.1 F0F1 ATP synthase subunit C -
  CH624_RS02765 (CH624_02765) atpF 546259..546729 (+) 471 WP_005652038.1 F0F1 ATP synthase subunit B -

Sequence

Protein


Download         Length: 167 a.a.        Molecular weight: 18555.22 Da        Isoelectric Point: 4.9925

>NTDB_id=269792 CH624_RS02725 WP_005659750.1 541424..541927(-) (luxS) [Haemophilus influenzae strain P665-7858]
MPLLDSFKVDHTKMNAPAVRIAKTMRTPKGDNITVFDLRFCIPNKEILSPKGIHTLEHLFAGFMRDHLNGDSIEIIDISP
MGCRTGFYMSLIGTPNEQEVSEAWLASMQDVLGVQDQAAIPELNIYQCGSYTEHSLEDAHEIAKNVIARGIGVNKNEDLS
LDNSLLK

Nucleotide


Download         Length: 504 bp        

>NTDB_id=269792 CH624_RS02725 WP_005659750.1 541424..541927(-) (luxS) [Haemophilus influenzae strain P665-7858]
ATGCCATTACTTGATAGTTTTAAAGTGGATCACACAAAAATGAACGCACCTGCAGTACGCATTGCAAAAACGATGCGCAC
GCCAAAAGGCGATAATATTACTGTTTTTGATTTACGTTTTTGTATTCCAAACAAAGAAATTCTTTCCCCAAAAGGCATTC
ATACACTTGAACATTTGTTTGCTGGATTTATGCGCGATCACTTAAATGGCGATAGCATAGAAATTATTGATATTTCTCCG
ATGGGATGTCGCACGGGATTTTATATGTCTTTGATTGGCACACCAAATGAACAGGAAGTATCTGAGGCTTGGTTAGCTTC
AATGCAAGATGTTTTAGGTGTACAAGATCAAGCTGCTATTCCCGAATTAAATATCTATCAATGCGGAAGCTATACGGAAC
ATTCCTTAGAAGATGCACACGAAATTGCCAAAAATGTTATCGCACGCGGTATAGGTGTAAATAAAAATGAAGATTTGTCA
CTCGATAATTCCTTATTAAAATAG

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(4-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

74.096

99.401

0.737

Multiple sequence alignment