Detailed information NTG0269635

Bioinformatically predicted

Overview

• Name: sbcB
• Type: Machinery gene
• Locus tag: CH635_RS06860
• Genome accession: NZ_CP031679
• Coordinates: 1395471..1396892 (+)
• Length: 473 a.a.
• NCBI ID: WP_005687198.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain P676-2514
• Function: promote homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1390471..1401892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CH635_RS06850 (CH635_06845)	-	1393671..1394579 (+)	909	WP_011272628.1	DUF5655 domain-containing protein	-
CH635_RS06855 (CH635_06850)	-	1394583..1395458 (+)	876	WP_011272627.1	hypothetical protein	-
CH635_RS06860 (CH635_06855)	sbcB	1395471..1396892 (+)	1422	WP_005687198.1	exodeoxyribonuclease I	Machinery gene
CH635_RS06865 (CH635_06860)	phoR	1397550..1398827 (-)	1278	WP_005653955.1	phosphate regulon sensor histidine kinase PhoR	-
CH635_RS06870 (CH635_06865)	phoB	1398824..1399519 (-)	696	WP_005650606.1	phosphate regulon transcriptional regulator PhoB	-
CH635_RS06875 (CH635_06870)	pstB	1399616..1400383 (-)	768	WP_005650603.1	phosphate ABC transporter ATP-binding protein PstB	-
CH635_RS06880 (CH635_06875)	pstA	1400393..1401241 (-)	849	WP_005650601.1	phosphate ABC transporter permease PstA	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 54323.71 Da
• Isoelectric Point: 5.7258

>NTDB_id=269635 CH635_RS06860 WP_005687198.1 1395471..1396892(+) (sbcB) [Haemophilus influenzae strain P676-2514]
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGKPIMFYCKQTNDYLPAPEAVMVTGITPQECNEKGLSEPEF
AANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPYEYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSF
RLEKLTKANGIEHENAHDAMADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSKLEERGVSSVPLKLVHINKCPILAPAKTLLPETANR
LGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG

Nucleotide

• Length: 1422 bp

>NTDB_id=269635 CH635_RS06860 WP_005687198.1 1395471..1396892(+) (sbcB) [Haemophilus influenzae strain P676-2514]
ATGGCAAAAGATTTCAGCTTTTTTATTTACGATTATGAAAGTTTTGGTGTAAATCCAGCAACAGATCGCCCTGCGCAATT
TGCGGGTATTCGTACAGATGCTGATTTTAATATCATTGGTAAACCAATAATGTTTTATTGTAAACAAACCAACGATTATT
TACCGGCTCCTGAAGCCGTAATGGTCACAGGAATTACGCCTCAAGAATGTAATGAAAAGGGGCTTTCAGAGCCTGAATTC
GCCGCAAATATCTTAGCAGAATTTTCCCAACCCAATACTTGTGTCATGGGTTATAACAATATTCGCTATGATGATGAAAT
GACGCGTTATACGTTTTATCGTAATTTTATTGATCCTTATGAATACAGCTGGAAAAATGGGAATTCACGCTGGGATTTGT
TAGATTTAGTGCGAGCCTGTTATGCCTTGCGTCCAGAAGGAATTAATTGGGCTTATGACGATGATGGAATGCCAAGTTTC
CGCTTAGAAAAACTCACTAAAGCAAATGGTATTGAGCATGAAAATGCTCACGATGCCATGGCGGATGTATATGCAACTAT
TGCTATGGCGAAATTAATTAAAGAAAAACAGCCTAAATTATTCCAATATTTCTTTGAAAATCGCGGTAAAAAAGAAATCG
AAAAATTAGTTGATACAGGCGCAATGACACCTTTAGTGCATGTTTCTGGAATGCTAGGGAATTATCGTGGAAATTGCACT
TGGGTTGCACCTTTAGCTTGGCATCCGACAAATCAAAATGCACTCATTGTTTGTGATTTAACTGGCGATATCGATAATTT
ATTAGCCAAAAGTGCGGATGAATTACGGACAGATTTATATACCAAAAAATCTAAATTAGAAGAAAGAGGAGTTTCATCTG
TTCCGTTAAAGCTTGTGCATATCAATAAATGTCCTATTTTAGCACCAGCTAAAACTTTGTTACCAGAAACAGCAAATCGA
TTGGGTATTGATCGACAATTATGCTTGGATAATCTTGCAAAATTACGAGCATCTTTTGATATTCGTGAAAAAGTGGCGGA
TATTTTTAATGAAGAACGTCAATTTGCATCGAATGATAATGTAGAAACTGAGTTATACAATGGCTTTTTTAGCAATGCTG
ATAAAAATAATATGGCTATTTTACGTAGTTTACCTGCAGAAAAATTATCTGAACATGGTTTAGCTTTTGAAGATAAACGT
ATCCTTGAATTATTATTCCATTATCGCGCTCGTCATTTTTATAAAACCCTCACACGCGCTGAACAAATTAAATGGAAAAA
ATACCGACAGAATAAACTTGAAAAAAGTGCGGTAGAGTTTGAATCAAGTTTACAACGTTTAGCTGAGGAACATTCAGATA
ATTCTGAAAAACTATCTTTGCTACAACAAGTATATGAATATGGTATAAAATTACTAGGTTAG

Domains

Predicted by InterProScan.

• Exonuclease C-terminal (ExoI_SH3) (208-468)

• Exonuclease (RNase_T) (9-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcB	Vibrio cholerae O1 biovar El Tor strain E7946	55.15	98.52	0.543