Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | BALH_RS06640 | Genome accession | NC_008600 |
| Coordinates | 1299393..1299716 (-) | Length | 107 a.a. |
| NCBI ID | WP_000578878.1 | Uniprot ID | A0A6L7H7A6 |
| Organism | Bacillus thuringiensis str. Al Hakam | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1294393..1304716
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BALH_RS06615 (BALH_1139) | - | 1294664..1295950 (+) | 1287 | WP_000246000.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| BALH_RS06620 (BALH_1140) | - | 1296145..1296714 (+) | 570 | WP_000767810.1 | signal peptidase I | - |
| BALH_RS06625 (BALH_1141) | - | 1296777..1297364 (+) | 588 | WP_000172840.1 | CalY family protein | - |
| BALH_RS06630 (BALH_1142) | - | 1297526..1298299 (+) | 774 | WP_000917478.1 | DUF4047 domain-containing protein | - |
| BALH_RS06635 (BALH_1143) | calY | 1298724..1299317 (+) | 594 | WP_000053734.1 | biofilm matrix protein CalY | - |
| BALH_RS06640 (BALH_1144) | sinR | 1299393..1299716 (-) | 324 | WP_000578878.1 | helix-turn-helix domain-containing protein | Regulator |
| BALH_RS06645 | - | 1299796..1299930 (-) | 135 | WP_000276214.1 | anti-repressor SinI family protein | - |
| BALH_RS06650 (BALH_1145) | inhA1 | 1300274..1302661 (+) | 2388 | WP_001035926.1 | M6 family metalloprotease immune inhibitor InhA1 | - |
| BALH_RS06655 (BALH_1146) | - | 1302833..1304200 (+) | 1368 | WP_000116793.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12319.17 Da Isoelectric Point: 9.6244
>NTDB_id=26956 BALH_RS06640 WP_000578878.1 1299393..1299716(-) (sinR) [Bacillus thuringiensis str. Al Hakam]
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
MIGERIKRLRLQKGISLTELAEKAGVAKSYISSIERNLQKNPSIQFLEKIAAVLQIPVDTLLHDETTKEANLDSEWTQLV
KDAMNSGVSKEQFREFLEFTKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=26956 BALH_RS06640 WP_000578878.1 1299393..1299716(-) (sinR) [Bacillus thuringiensis str. Al Hakam]
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAAATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGTTTACAAAAAGGTATTTCATTAACTGAACTTGCCGAAAAAGCTGGCGTTGC
TAAATCTTACATTAGTTCTATAGAACGAAATTTACAAAAAAACCCTTCCATTCAGTTTCTTGAAAAAATCGCAGCAGTTC
TACAAATTCCAGTTGATACTTTACTTCATGATGAAACAACAAAGGAAGCTAACCTAGACTCCGAATGGACACAGCTCGTC
AAAGATGCAATGAACTCTGGTGTCTCCAAAGAACAATTTCGTGAATTTCTTGAATTTACAAAATGGAAGCAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
67.89 |
100 |
0.692 |