Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   C3F22_RS15890 Genome accession   NZ_CP026420
Coordinates   3269728..3271293 (-) Length   521 a.a.
NCBI ID   WP_104426955.1    Uniprot ID   A0A2L0I9C1
Organism   Acinetobacter sp. ACNIH1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3264728..3276293
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3F22_RS15875 (C3F22_15885) gpmI 3265545..3267092 (+) 1548 WP_104426952.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -
  C3F22_RS15880 (C3F22_15890) - 3267116..3268288 (+) 1173 WP_104426953.1 S41 family peptidase -
  C3F22_RS15885 (C3F22_15895) pilR 3268289..3269710 (-) 1422 WP_171284763.1 sigma-54-dependent transcriptional regulator Regulator
  C3F22_RS15890 (C3F22_15900) pilS 3269728..3271293 (-) 1566 WP_104426955.1 sensor histidine kinase Regulator
  C3F22_RS15895 (C3F22_15905) - 3271321..3271956 (-) 636 WP_005233474.1 response regulator -
  C3F22_RS15900 (C3F22_15910) - 3272173..3273225 (+) 1053 WP_034590260.1 serine hydrolase -
  C3F22_RS15905 (C3F22_15915) thrC 3273284..3274423 (-) 1140 WP_104426956.1 threonine synthase -
  C3F22_RS15910 (C3F22_15920) - 3274481..3275785 (-) 1305 WP_005233480.1 homoserine dehydrogenase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59671.72 Da        Isoelectric Point: 6.3704

>NTDB_id=269247 C3F22_RS15890 WP_104426955.1 3269728..3271293(-) (pilS) [Acinetobacter sp. ACNIH1]
MAQTSSYSELNQYHLGLWYSAYRLIISTGLLLIFLLTYPDMTADYQYPKLYHYALMIGVAVNTVQLFTLRWVKRLIQPQF
ILIFASDVFFLSLLTLASQGPNVHLGLIFVITIFSASLLLDAKKALIITLIAVISIIYQHFIGSIFAFSSLTNIGNSALL
AFLFFVVYGSGQIAVRRFQILENLNFSQSLELYRLQNINRYILEQIETGYLVLDENYHVVLSNPAACHLLGIEPMYTHER
FSLYQSQNDLFELIRFENLENGERFQFESQQSRYNIHVQVQKLIVPHQTLTLLVLQDARKLNQQVQQLKLAALGQLSASI
AHEIRNPLAAIVQANDLYLDSEPEQQQVLHQMISRQATRIDRIIQDTLNMVKNKETHPVVIQLNEFIPLFIQEDLADVAD
QIQFNIDVPLAIQFDEAQLRQILINLIRNAIRHNSPDSPHIQLNIHPYEHKVWIDVRDFGSGVATHDQELLFKPFFSTSI
HGTGLGLYLSHSFCEANQAQLNYISQEQGACFRISCQRATA

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=269247 C3F22_RS15890 WP_104426955.1 3269728..3271293(-) (pilS) [Acinetobacter sp. ACNIH1]
ATGGCGCAAACATCCAGTTATTCTGAACTGAATCAATATCATCTGGGCCTATGGTATAGCGCCTACCGCCTGATTATCAG
CACGGGTCTGTTGCTGATTTTCCTGCTGACTTATCCCGATATGACTGCGGATTATCAGTATCCTAAACTCTATCACTACG
CCTTAATGATTGGCGTCGCCGTCAATACGGTGCAACTGTTTACGCTGAGATGGGTAAAGCGCCTGATTCAGCCACAGTTC
ATTCTAATTTTTGCCAGCGATGTCTTTTTTCTCAGTTTATTGACCTTGGCCAGTCAGGGTCCAAATGTCCATCTCGGACT
GATTTTTGTTATTACCATTTTTTCAGCTTCATTATTACTGGATGCCAAGAAAGCCCTGATCATCACCCTGATTGCGGTGA
TTAGTATCATCTACCAGCATTTTATCGGCAGTATTTTTGCCTTTTCCTCGCTTACCAATATCGGGAATAGTGCCCTGCTG
GCCTTTCTATTTTTTGTCGTCTATGGCTCGGGACAAATTGCGGTACGGCGCTTTCAGATTCTAGAAAACCTGAATTTTTC
TCAATCGCTGGAACTATATCGCTTACAGAATATTAACCGCTATATTCTGGAACAGATTGAAACCGGCTATCTGGTCTTAG
ATGAGAATTACCATGTGGTGCTCAGCAATCCGGCTGCCTGTCATCTGCTGGGTATTGAGCCAATGTATACCCATGAAAGA
TTTTCGTTATACCAATCTCAAAATGATTTGTTTGAACTGATCCGTTTTGAAAATCTGGAAAATGGCGAGCGGTTTCAATT
TGAATCCCAGCAGAGTCGTTATAATATTCACGTGCAGGTACAAAAGCTGATTGTGCCGCACCAGACTCTGACTCTCCTCG
TGCTGCAAGATGCCCGCAAACTTAATCAGCAGGTGCAACAGTTAAAGCTTGCTGCTCTAGGCCAGCTTTCCGCCAGTATT
GCCCATGAAATTCGCAATCCTCTGGCTGCCATTGTACAGGCCAATGATCTTTATCTCGATTCTGAACCTGAACAGCAACA
GGTTCTGCATCAGATGATCAGCCGACAGGCTACCCGTATTGATCGGATTATTCAGGACACCCTGAATATGGTGAAAAACA
AGGAAACCCATCCGGTCGTAATTCAGCTGAATGAATTTATACCACTGTTTATTCAGGAAGATTTAGCAGATGTGGCGGAT
CAGATTCAATTTAATATTGATGTACCACTGGCAATTCAGTTCGATGAAGCCCAGTTACGTCAGATTCTGATTAACCTGAT
TCGTAATGCCATCCGTCATAATTCACCGGATTCACCCCATATTCAATTGAATATTCACCCATATGAACATAAGGTATGGA
TAGATGTCCGGGATTTTGGCTCTGGTGTTGCCACCCATGATCAGGAATTATTATTTAAACCTTTTTTCAGCACGTCTATC
CATGGAACGGGACTCGGACTATATTTATCACACAGTTTTTGTGAAGCCAATCAGGCACAACTCAACTACATTTCACAAGA
ACAGGGCGCATGCTTTCGGATTAGCTGTCAACGTGCGACAGCATAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(415-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2L0I9C1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

58.02

96.929

0.562

Multiple sequence alignment