Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   C3F34_RS04900 Genome accession   NZ_CP026412
Coordinates   1044906..1047128 (+) Length   740 a.a.
NCBI ID   WP_104441175.1    Uniprot ID   A0A2L0HT68
Organism   Acinetobacter sp. ACNIH2     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1039906..1052128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3F34_RS04875 (C3F34_04875) - 1039991..1040830 (+) 840 WP_044740572.1 HlyC/CorC family transporter -
  C3F34_RS04880 (C3F34_04880) lnt 1040827..1042386 (+) 1560 WP_104441173.1 apolipoprotein N-acyltransferase -
  C3F34_RS04885 (C3F34_04885) - 1042459..1042803 (-) 345 WP_044740574.1 hypothetical protein -
  C3F34_RS04890 (C3F34_04890) gspG 1043079..1043516 (-) 438 WP_016168363.1 type II secretion system major pseudopilin GspG -
  C3F34_RS04895 (C3F34_04895) gspF 1043548..1044753 (-) 1206 WP_104441174.1 type II secretion system inner membrane protein GspF -
  C3F34_RS04900 (C3F34_04900) priA 1044906..1047128 (+) 2223 WP_104441175.1 primosomal protein N' Machinery gene
  C3F34_RS04905 (C3F34_04905) - 1047184..1049025 (+) 1842 WP_104441176.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  C3F34_RS04910 (C3F34_04910) - 1049076..1049951 (+) 876 WP_016168367.1 Hsp33 family molecular chaperone HslO -
  C3F34_RS04915 (C3F34_04915) - 1050251..1050715 (+) 465 WP_104441177.1 DUF2147 domain-containing protein -
  C3F34_RS04920 (C3F34_04920) - 1050867..1051823 (+) 957 WP_104441178.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84277.34 Da        Isoelectric Point: 8.5905

>NTDB_id=269169 C3F34_RS04900 WP_104441175.1 1044906..1047128(+) (priA) [Acinetobacter sp. ACNIH2]
MPNTVSPPFVPYRIRVAVPAHVYDCFDYQISAEDYAQAKVGARVAVPFGSRNLIGVIMQKLTPDTPENPKFKLKPIQALL
DDDAILDNKVLTLLTWAAQYYQFPIGEVMQSALPTLLRQGKPYDLLAHMWLLLDQHAEDKIKRSEKQQHAYKILKLHPVG
TSENILNLAGIETATLKALEKKGICEAYLEQKDFSPQALSLAQMPLTANPDQKHAIQQVLKSLSSYHAYLLDGLTGSGKT
EVYLQIMYEVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLTDAKRLQAWQSAQMGKASIILGTRSAIYTPL
HNLGLIILDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSMESYALADQGKLTRLELNERAGTALLPKLHI
LDLKVGRKQYGFSQFLLDEMHKRLARKEQVLIFLNRRGYAPVLICESCAWQAKCPHCDANFTLHTQPYQHLHCHHCGTIH
RMPDHCPQCHHTELKPIGMGTAKVEESLKELFPEFEVIRVDRDSTSRVGSWQKIYDRIQKSEPIILLGTQMLAKGHHFPY
VSLVAILDIDSGLLSVDFRAPERTAQLIVQVAGRAGRGEKKGDVYLQTLRPEHPLLHTLVDGDYRQFARQTLKERLQALF
PPYRYAALIRCESKSQEQNQQYLTEHAQQLRQISELNIDIWGPIPAPMERKAGRYQAHMVLFSQDRARLHYYLRAWWQNM
LQHKPSSMKLSLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=269169 C3F34_RS04900 WP_104441175.1 1044906..1047128(+) (priA) [Acinetobacter sp. ACNIH2]
ATGCCAAACACAGTATCGCCCCCTTTCGTGCCTTATCGGATTCGCGTAGCCGTTCCAGCCCATGTTTACGACTGCTTCGA
CTATCAGATTTCCGCAGAGGATTATGCGCAGGCGAAAGTCGGAGCGCGTGTTGCTGTGCCCTTTGGATCTCGAAATTTAA
TTGGGGTGATTATGCAAAAACTCACACCTGATACTCCTGAGAATCCCAAGTTTAAGCTAAAACCCATTCAAGCTTTGCTA
GATGACGATGCCATTCTAGATAATAAAGTTTTAACTTTGTTGACATGGGCCGCACAATATTACCAATTCCCGATTGGTGA
AGTGATGCAGAGTGCTCTGCCGACCTTATTACGGCAAGGCAAACCTTATGATTTACTGGCACATATGTGGCTTCTGCTAG
ACCAACATGCTGAGGACAAAATCAAGCGTTCTGAAAAACAACAACATGCCTATAAAATTTTAAAATTACACCCTGTAGGT
ACCTCAGAAAATATTTTGAATTTAGCGGGCATTGAAACCGCCACCTTAAAAGCTTTGGAAAAGAAAGGCATCTGTGAGGC
TTATTTAGAACAAAAAGATTTTAGCCCACAAGCCCTGAGTTTGGCGCAAATGCCACTGACCGCCAACCCCGATCAAAAGC
ATGCCATTCAGCAGGTGCTAAAATCACTCTCGTCTTATCATGCCTATTTACTGGATGGTTTAACGGGTAGTGGTAAAACT
GAAGTTTACTTGCAAATCATGTACGAGGTCCTGAAGCAAGGCAAACAAGTGTTGGTGTTGGTACCTGAAATTGGGCTGAC
ACCCCAAACCATTAGTCGCTTTCAATCGCGCTTCCACTGTCATATTGCCCTGCTGCATTCGGGACTGACGGATGCCAAAC
GCTTGCAAGCATGGCAAAGTGCGCAAATGGGTAAAGCTTCGATTATTTTAGGCACACGCTCCGCCATTTATACCCCGTTG
CATAATTTAGGTTTGATCATTTTAGATGAAGAGCATGATCTCTCTTTTAAGCAGCAAGAAGGTTTTCGTTATCATGCGCG
TGATGTCGCGCTCTATCGCGCGCATTTGGAAAACTGCCCCATTATTTTGGGTTCAGCAACGCCGAGCATGGAAAGTTATG
CACTGGCCGATCAAGGTAAACTGACCCGACTAGAATTAAATGAACGTGCAGGCACGGCACTGTTGCCTAAGTTGCACATC
TTGGATTTAAAAGTCGGGCGCAAACAGTATGGTTTTAGTCAGTTTTTACTGGATGAAATGCACAAGCGTCTGGCGCGCAA
AGAACAGGTACTGATTTTTCTCAATCGACGAGGCTATGCCCCTGTATTGATTTGTGAAAGTTGTGCTTGGCAAGCGAAAT
GTCCGCATTGTGACGCCAATTTCACCTTACATACTCAACCTTATCAGCATTTGCATTGTCATCATTGTGGCACCATTCAT
CGCATGCCAGATCATTGCCCGCAATGTCATCATACTGAACTCAAACCGATTGGTATGGGGACTGCCAAAGTTGAAGAAAG
TTTAAAAGAACTCTTTCCAGAGTTTGAGGTCATTCGGGTGGATCGAGACTCCACCAGTCGTGTCGGTAGTTGGCAAAAAA
TTTATGATCGCATTCAAAAAAGTGAGCCGATTATTTTACTTGGCACGCAGATGCTCGCCAAAGGACATCATTTTCCCTAT
GTGTCTTTGGTGGCAATTTTGGACATTGATTCAGGCTTACTGAGTGTCGATTTTCGTGCACCAGAACGCACTGCCCAACT
CATTGTTCAAGTGGCGGGCCGCGCAGGTCGTGGTGAGAAAAAAGGCGATGTCTATTTGCAGACCCTGCGCCCAGAACACC
CTTTATTACACACCTTAGTAGATGGCGATTATCGACAATTTGCCCGTCAAACGTTGAAAGAACGACTACAAGCATTGTTC
CCACCCTATCGTTATGCGGCGCTGATTCGCTGTGAGTCGAAAAGTCAGGAACAAAATCAGCAATATCTGACTGAACATGC
ACAACAACTCCGTCAGATTTCCGAACTCAACATCGATATTTGGGGACCAATTCCCGCCCCGATGGAACGTAAAGCAGGTC
GTTATCAAGCGCATATGGTGTTATTTTCCCAAGATCGGGCTCGTTTACATTACTACTTAAGAGCTTGGTGGCAAAATATG
TTGCAGCACAAGCCTTCCAGCATGAAACTTAGTTTGGATATAGACCCACAGGAATTGAGTTGA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(209-369)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2L0HT68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

70.121

100

0.704

Multiple sequence alignment