Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C3F42_RS20120 Genome accession   NZ_CP026386
Coordinates   4332195..4332596 (+) Length   133 a.a.
NCBI ID   WP_023631716.1    Uniprot ID   A0A1H9SY95
Organism   Pseudomonas sp. PONIH3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4327195..4337596
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3F42_RS20090 (C3F42_20090) - 4327249..4328253 (-) 1005 WP_038706925.1 aspartate carbamoyltransferase catalytic subunit -
  C3F42_RS20095 (C3F42_20095) pyrR 4328266..4328784 (-) 519 WP_038706924.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  C3F42_RS20100 (C3F42_20100) ruvX 4328837..4329262 (-) 426 WP_023633141.1 Holliday junction resolvase RuvX -
  C3F42_RS20105 (C3F42_20105) - 4329262..4329831 (-) 570 WP_038706923.1 YqgE/AlgH family protein -
  C3F42_RS20110 (C3F42_20110) - 4329925..4330824 (-) 900 WP_104444798.1 energy transducer TonB -
  C3F42_RS20115 (C3F42_20115) gshB 4331058..4332011 (-) 954 WP_046853923.1 glutathione synthase -
  C3F42_RS20120 (C3F42_20120) pilG 4332195..4332596 (+) 402 WP_023631716.1 twitching motility response regulator PilG Regulator
  C3F42_RS20125 (C3F42_20125) pilH 4332644..4333009 (+) 366 WP_023631715.1 twitching motility response regulator PilH -
  C3F42_RS20130 (C3F42_20130) - 4333006..4333560 (+) 555 WP_038706921.1 chemotaxis protein CheW -
  C3F42_RS20135 (C3F42_20135) - 4333624..4335648 (+) 2025 WP_094012386.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14752.11 Da        Isoelectric Point: 6.7058

>NTDB_id=269058 C3F42_RS20120 WP_023631716.1 4332195..4332596(+) (pilG) [Pseudomonas sp. PONIH3]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIVDHKPRVIFVDVLMPRLDGYQTCAIIKHNREFKDTP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRACVPGFAAQDPHAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=269058 C3F42_RS20120 WP_023631716.1 4332195..4332596(+) (pilG) [Pseudomonas sp. PONIH3]
ATGGAACAACCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAGGC
AGGCTGCGAGGTGATCACCGCCAGTGACGGCTTCGACGCCCTGGCCAAGATCGTCGACCACAAACCGCGGGTCATCTTCG
TCGATGTGCTGATGCCGCGCCTCGACGGCTACCAGACCTGCGCCATCATCAAGCACAACCGCGAGTTCAAGGACACCCCG
GTGATCCTGCTCTCTTCCCGCGACGGCCTGTTCGACAAGGCCCGCGGCCGGGTGGTCGGTTCCGACCAGTTCCTGACCAA
ACCTTTCAGCAAGGAAGAACTGCTCGACGCGATCCGTGCCTGCGTGCCGGGCTTCGCCGCGCAGGATCCACACGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1H9SY95

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.213

91.729

0.617

Multiple sequence alignment