Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   C2767_RS17875 Genome accession   NZ_CP026368
Coordinates   3586157..3586753 (-) Length   198 a.a.
NCBI ID   WP_023289053.1    Uniprot ID   A0A2N4W2M8
Organism   Klebsiella quasipneumoniae strain A708     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3581157..3591753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2767_RS17860 (C2767_18045) helD 3581368..3583422 (-) 2055 WP_112201719.1 DNA helicase IV -
  C2767_RS17865 (C2767_18050) - 3583547..3583993 (+) 447 WP_004201437.1 YccF domain-containing protein -
  C2767_RS17870 (C2767_18055) yccS 3584011..3586146 (+) 2136 WP_023289054.1 YccS family putative transporter -
  C2767_RS17875 (C2767_18060) sxy/tfoX 3586157..3586753 (-) 597 WP_023289053.1 TfoX/Sxy family DNA transformation protein Regulator
  C2767_RS30420 - 3586771..3587076 (-) 306 WP_181573406.1 hypothetical protein -
  C2767_RS17885 (C2767_18070) sulA 3587102..3587611 (+) 510 WP_023289052.1 SOS-induced cell division inhibitor SulA -
  C2767_RS17890 (C2767_18075) ompA 3587964..3589034 (+) 1071 WP_044521956.1 porin OmpA -
  C2767_RS17895 (C2767_18080) matP 3589181..3589633 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  C2767_RS17900 (C2767_18085) - 3589819..3591576 (+) 1758 WP_032455286.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22670.34 Da        Isoelectric Point: 10.2333

>NTDB_id=268956 C2767_RS17875 WP_023289053.1 3586157..3586753(-) (sxy/tfoX) [Klebsiella quasipneumoniae strain A708]
MRKLVCPRLPQFQACVSPLGQLHSRPLFGGYSLAIEDTVFAMVAEGNIYLKACEQSAAYRVEHHNPLLMLRRHGRIVPLK
YYQIDDALWRDEKQLFRLSLMSWQSAQREKYRRRSSGRLKDLPNISFHMELQLIHSGIPDVLALREVGARQAWLKLRENN
ASLSHNVLLALEGAIVGVHAAALPTPRRQELLEWASAR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=268956 C2767_RS17875 WP_023289053.1 3586157..3586753(-) (sxy/tfoX) [Klebsiella quasipneumoniae strain A708]
ATGAGAAAACTCGTATGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCTCCGCTGGGTCAACTTCACTCTCGCCCCCT
GTTTGGCGGCTACAGCTTGGCTATCGAAGATACCGTGTTTGCGATGGTGGCAGAGGGGAATATTTATCTAAAGGCCTGCG
AGCAGAGCGCTGCCTATCGGGTAGAACACCATAATCCTTTATTGATGCTGCGCCGACACGGGCGCATCGTGCCGCTAAAG
TATTATCAAATCGACGATGCCTTGTGGCGCGATGAGAAACAGCTTTTCCGCTTGTCGCTGATGTCGTGGCAGAGCGCCCA
GCGTGAAAAATATCGCCGCCGGTCGTCGGGACGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACTCGGGCATTCCAGACGTGTTAGCACTACGGGAGGTGGGCGCCCGCCAGGCCTGGCTAAAGCTGCGCGAGAACAAT
GCTTCCCTATCGCACAACGTCTTGCTGGCGCTGGAGGGGGCTATCGTTGGCGTTCATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTGGAATGGGCGTCTGCGCGCTAA

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(16-105)

TfoX C-terminal domain (TfoX_C)

(117-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2N4W2M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

49.746

99.495

0.495

Multiple sequence alignment