Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BA6348_RS03915 Genome accession   NZ_CP026363
Coordinates   761366..762319 (+) Length   317 a.a.
NCBI ID   WP_122952564.1    Uniprot ID   A0A3M8B898
Organism   Brevibacillus agri strain DSM 6348     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 756366..767319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BA6348_RS03900 (BA6348_03890) - 758141..758497 (-) 357 WP_005830165.1 response regulator -
  BA6348_RS03905 (BA6348_03895) - 758847..760217 (+) 1371 Protein_702 MATE family efflux transporter -
  BA6348_RS03910 (BA6348_03900) - 760351..761103 (+) 753 WP_007778317.1 DUF4097 family beta strand repeat-containing protein -
  BA6348_RS03915 (BA6348_03905) ceuB 761366..762319 (+) 954 WP_122952564.1 ABC transporter permease Machinery gene
  BA6348_RS03920 (BA6348_03910) - 762316..763257 (+) 942 WP_007778320.1 iron chelate uptake ABC transporter family permease subunit -
  BA6348_RS03925 (BA6348_03915) - 763254..764012 (+) 759 WP_007778323.1 ABC transporter ATP-binding protein -
  BA6348_RS03930 (BA6348_03920) - 764119..765099 (+) 981 WP_007778327.1 siderophore ABC transporter substrate-binding protein -
  BA6348_RS03935 (BA6348_03925) - 765239..766114 (-) 876 WP_005830155.1 ABC transporter ATP-binding protein -
  BA6348_RS03940 (BA6348_03930) - 766322..766621 (-) 300 WP_005830153.1 YxcD family protein -
  BA6348_RS03945 (BA6348_03935) - 766609..767049 (-) 441 WP_005830151.1 hypothetical protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35110.42 Da        Isoelectric Point: 9.8050

>NTDB_id=268884 BA6348_RS03915 WP_122952564.1 761366..762319(+) (ceuB) [Brevibacillus agri strain DSM 6348]
MKKRYLVVALILLSMVSLFIGVKDISPLELFNLSDDKVQVMWISRIPRLISIIIAGISMSVVGLIMQQLTRNKFVSPTTA
GTEDSVRFGILVSLLVFVDASVWVKLLVAFVFALLGTFIFMKILDRVKYKDSIFIPLVGLMFGNIVGSITTFFAYKHDLI
QNMSSWLHGDFSSIMRGNYELLYISIPLVVIAYLFANKFTIAGMGEEFAINLGLNYKQVVNIGLAIVAMVSSVVILTVGT
IPFLGLIIPNIVTLYLGDNLKKSLAHTALLGAVFVLCCDILGRLIIFPYEISIGLMVGVVGSGIFVYLLMRRKAYER

Nucleotide


Download         Length: 954 bp        

>NTDB_id=268884 BA6348_RS03915 WP_122952564.1 761366..762319(+) (ceuB) [Brevibacillus agri strain DSM 6348]
ATGAAAAAAAGATATTTGGTTGTGGCCCTGATTCTGCTATCAATGGTATCCCTGTTTATCGGCGTGAAGGACATTTCGCC
CCTGGAGCTGTTCAATCTCAGCGACGACAAGGTTCAGGTGATGTGGATCAGCCGGATTCCCCGCCTGATTAGCATCATCA
TCGCCGGTATCAGCATGAGTGTGGTCGGCCTCATCATGCAGCAACTGACCCGCAATAAATTCGTCTCGCCTACGACGGCG
GGGACCGAAGATTCTGTCCGCTTCGGGATTCTCGTCTCCTTGCTTGTGTTTGTCGACGCCTCTGTATGGGTGAAGCTGCT
CGTGGCATTCGTTTTCGCTCTGCTCGGAACGTTTATCTTCATGAAAATTCTCGACAGAGTGAAGTACAAAGACTCGATCT
TCATTCCGCTGGTCGGGCTAATGTTCGGGAATATCGTCGGGTCGATCACGACGTTTTTCGCCTACAAGCACGACCTGATC
CAGAACATGTCGTCCTGGTTGCACGGCGATTTTTCCTCCATCATGAGGGGCAACTACGAGCTTCTATACATAAGCATTCC
GCTGGTCGTCATTGCGTACCTGTTTGCCAACAAGTTTACGATCGCAGGGATGGGCGAGGAATTTGCCATCAACCTCGGGC
TGAATTACAAGCAGGTCGTCAATATCGGGCTGGCGATTGTCGCGATGGTTTCGTCCGTCGTCATCCTCACAGTGGGAACG
ATCCCGTTTTTAGGGCTTATTATTCCTAATATTGTGACGCTTTATCTCGGTGACAACCTGAAAAAAAGCTTGGCCCATAC
CGCCTTGCTGGGCGCGGTGTTCGTCCTCTGCTGCGATATTTTGGGACGCCTCATCATCTTCCCGTACGAAATTTCGATCG
GTTTGATGGTCGGGGTAGTGGGCAGCGGTATATTCGTGTACTTACTCATGAGAAGAAAGGCATATGAACGATGA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3M8B898

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.952

98.738

0.543

Multiple sequence alignment