Detailed information    

insolico Bioinformatically predicted

Overview


Name   comS   Type   Regulator
Locus tag   BV11031_RS23030 Genome accession   NZ_CP026362
Coordinates   3145263..3145403 (-) Length   46 a.a.
NCBI ID   WP_013307914.1    Uniprot ID   -
Organism   Bacillus vallismortis strain DSM 11031     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 3140263..3150403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV11031_RS23025 - 3144145..3145317 (-) 1173 Protein_3247 condensation domain-containing protein -
  BV11031_RS23030 comS 3145263..3145403 (-) 141 WP_013307914.1 competence protein ComS Regulator
  BV11031_RS23035 srfAB 3145447..3148539 (-) 3093 Protein_3249 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5215.99 Da        Isoelectric Point: 8.5244

>NTDB_id=268874 BV11031_RS23030 WP_013307914.1 3145263..3145403(-) (comS) [Bacillus vallismortis strain DSM 11031]
MNRSGKHLISSIILYPQPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=268874 BV11031_RS23030 WP_013307914.1 3145263..3145403(-) (comS) [Bacillus vallismortis strain DSM 11031]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCAGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTTTGCTGGAGGGAGAAGTAG

Domains


Predicted by InterproScan.

(1-44)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978


Multiple sequence alignment