Detailed information NTG0268859

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BV11031_RS18945
• Genome accession: NZ_CP026362
• Coordinates: 3576079..3577191 (-)
• Length: 370 a.a.
• NCBI ID: WP_129550834.1
• Uniprot ID: -
• Organism: Bacillus vallismortis strain DSM 11031
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3571079..3582191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV11031_RS18930 (BV11031_18900)	gyrA	3571169..3573634 (-)	2466	WP_129550833.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
BV11031_RS18935 (BV11031_18905)	gyrB	3573845..3575761 (-)	1917	WP_039074860.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BV11031_RS18940 (BV11031_18910)	remB	3575816..3576061 (-)	246	WP_039074861.1	extracellular matrix regulator RemB	-
BV11031_RS18945 (BV11031_18915)	recF	3576079..3577191 (-)	1113	WP_129550834.1	DNA replication/repair protein RecF	Machinery gene
BV11031_RS18950 (BV11031_18920)	rlbA	3577207..3577422 (-)	216	WP_003219264.1	ribosome maturation protein RlbA	-
BV11031_RS18955 (BV11031_18925)	dnaN	3577554..3578690 (-)	1137	WP_039074863.1	DNA polymerase III subunit beta	-
BV11031_RS18960 (BV11031_18930)	dnaA	3578877..3580217 (-)	1341	WP_039074864.1	chromosomal replication initiator protein DnaA	-
BV11031_RS18965 (BV11031_18935)	rpmH	3580839..3580973 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
BV11031_RS18970 (BV11031_18940)	rnpA	3581124..3581474 (+)	351	WP_003242628.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42438.43 Da
• Isoelectric Point: 7.1295

>NTDB_id=268859 BV11031_RS18945 WP_129550834.1 3576079..3577191(-) (recF) [Bacillus vallismortis strain DSM 11031]
MYIQNLELTSYRNYDHTELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWEKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPIYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLVEVASKVVVKRLQFTAQLEKWAQPIHTGISRGLEELTLKYHTALEVSDPEDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=268859 BV11031_RS18945 WP_129550834.1 3576079..3577191(-) (recF) [Bacillus vallismortis strain DSM 11031]
TTGTATATCCAGAACTTAGAACTGACATCTTACCGCAACTACGACCATACTGAACTCCAATTTGAAAACAAAGTAAATGT
CATCATCGGAGAAAACGCCCAGGGGAAAACAAATCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAGTCGCATCGGA
CATCAAATGACAAAGAACTTATACGGTGGGAAAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAATACCATCATGTTCGCACCGGAAGATTTAAATCTGGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTCGACATGGAAATCGGACAGGTTTCCCCTATCTATCTGCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGA
AATCATTTTTTGAAGCAGCTGCAAACAAGAAAACAAACTGACAGAACAATGCTCGATGTCTTGACCGATCAGCTTGTAGA
AGTTGCGTCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCGCAGCTCGAAAAATGGGCACAGCCTATTCATACGGGCA
TCTCAAGAGGGCTTGAAGAGCTGACCCTGAAGTACCATACGGCTCTTGAGGTATCAGATCCTGAAGACTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGCGGTGTTACGCTTTCGGGGCCTCATCG
TGACGATGTCCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACAACGGCATTGT
CCCTTAAACTGGCGGAGATTGACCTGATCCATGAGGAAATCGGAGAATACCCCATTTTACTATTGGATGATGTATTAAGT
GAGCTGGATGATTATCGCCAGTCGCACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAGAACGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	98.108	100	0.981