Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BV11031_RS18720 | Genome accession | NZ_CP026362 |
| Coordinates | 3535388..3535672 (+) | Length | 94 a.a. |
| NCBI ID | WP_039076459.1 | Uniprot ID | - |
| Organism | Bacillus vallismortis strain DSM 11031 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3530388..3540672
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV11031_RS18705 (BV11031_18675) | - | 3530577..3531890 (-) | 1314 | WP_129550823.1 | ubiquitin-like domain-containing protein | - |
| BV11031_RS18710 (BV11031_18680) | - | 3532046..3532813 (-) | 768 | WP_129550824.1 | TatD family hydrolase | - |
| BV11031_RS18715 (BV11031_18685) | metG | 3532892..3534886 (-) | 1995 | WP_129550825.1 | methionine--tRNA ligase | - |
| BV11031_RS18720 (BV11031_18690) | abrB | 3535388..3535672 (+) | 285 | WP_039076459.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BV11031_RS18725 (BV11031_18695) | rsmI | 3535721..3536599 (-) | 879 | WP_129550826.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BV11031_RS18730 (BV11031_18700) | - | 3536574..3536873 (-) | 300 | WP_129550827.1 | GIY-YIG nuclease family protein | - |
| BV11031_RS18735 (BV11031_18705) | - | 3536860..3537603 (-) | 744 | WP_129550828.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BV11031_RS18740 (BV11031_18710) | yabA | 3537662..3538021 (-) | 360 | WP_039076463.1 | replication initiation-control protein YabA | - |
| BV11031_RS18745 (BV11031_18715) | ricT | 3538036..3538863 (-) | 828 | WP_003242158.1 | competence/sporulation regulator complex protein RicT | - |
| BV11031_RS18750 (BV11031_18720) | holB | 3538866..3539855 (-) | 990 | WP_121641672.1 | DNA polymerase III subunit delta' | - |
| BV11031_RS18755 (BV11031_18725) | - | 3539867..3540307 (-) | 441 | WP_039076465.1 | YaaR family protein | - |
| BV11031_RS18760 (BV11031_18730) | darA | 3540320..3540649 (-) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10551.30 Da Isoelectric Point: 6.3482
>NTDB_id=268857 BV11031_RS18720 WP_039076459.1 3535388..3535672(+) (abrB) [Bacillus vallismortis strain DSM 11031]
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSKEGAE
QIISEIQNQLQNLK
MKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLANGKLVLSKEGAE
QIISEIQNQLQNLK
Nucleotide
Download Length: 285 bp
>NTDB_id=268857 BV11031_RS18720 WP_039076459.1 3535388..3535672(+) (abrB) [Bacillus vallismortis strain DSM 11031]
ATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAGTTGCGTCGTACTCTAGG
AATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACATGACTT
GCCAAGTAACAGGTGAAGTTTCTGATGATAACCTTAAACTTGCAAACGGTAAATTAGTTCTTAGTAAAGAAGGCGCTGAG
CAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAGTTGCGTCGTACTCTAGG
AATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACATGACTT
GCCAAGTAACAGGTGAAGTTTCTGATGATAACCTTAAACTTGCAAACGGTAAATTAGTTCTTAGTAAAGAAGGCGCTGAG
CAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
98.936 |
100 |
0.989 |