Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   BV11031_RS12360 Genome accession   NZ_CP026362
Coordinates   2284721..2285872 (-) Length   383 a.a.
NCBI ID   WP_010329385.1    Uniprot ID   -
Organism   Bacillus vallismortis strain DSM 11031     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 2279721..2290872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV11031_RS12330 (BV11031_12315) - 2279854..2280594 (+) 741 WP_010329389.1 lytic transglycosylase domain-containing protein -
  BV11031_RS12335 (BV11031_12320) - 2280850..2281248 (+) 399 WP_010329388.1 thiol management oxidoreductase -
  BV11031_RS12340 (BV11031_12325) spxH 2281245..2282144 (+) 900 WP_010329387.1 protease adaptor protein SpxH -
  BV11031_RS12350 (BV11031_12335) - 2282458..2282625 (+) 168 WP_010329386.1 hypothetical protein -
  BV11031_RS12355 (BV11031_12340) pepF 2282661..2284490 (-) 1830 WP_167470885.1 oligoendopeptidase F -
  BV11031_RS12360 (BV11031_12345) coiA 2284721..2285872 (-) 1152 WP_010329385.1 competence protein CoiA family protein Machinery gene
  BV11031_RS12365 (BV11031_12350) mecA 2286031..2286687 (-) 657 WP_010329384.1 adaptor protein MecA Regulator
  BV11031_RS12370 - 2286654..2286779 (-) 126 WP_120698858.1 hypothetical protein -
  BV11031_RS12375 (BV11031_12355) - 2286964..2287620 (+) 657 WP_121642321.1 TerC family protein -
  BV11031_RS12380 (BV11031_12360) spx 2287663..2288058 (-) 396 WP_010329382.1 transcriptional regulator Spx -
  BV11031_RS12385 (BV11031_12365) - 2288239..2288817 (-) 579 WP_010329381.1 GNAT family N-acetyltransferase -
  BV11031_RS12390 (BV11031_12370) - 2288982..2290196 (-) 1215 WP_082246327.1 MFS transporter -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44890.18 Da        Isoelectric Point: 10.0287

>NTDB_id=268834 BV11031_RS12360 WP_010329385.1 2284721..2285872(-) (coiA) [Bacillus vallismortis strain DSM 11031]
MFSAVTEDGQMFHLLGAQQSRKLKRGRFFCPVCGGELDVKLGLQKAPHFAHKQNKSCSIEVEPESAYHLEGKRQLYVWLK
TQHASPVLEPYIKKIKQRPDIMAKIKGRMLAVEYQCATLAPDVFQKRTEGFTREEIFVQWIMGQSRLKRTAPSFYQFSAF
HWQFINVSPYKSLICYCPETRSFSRLSCIIPFYANHSYSSVQTIPIHRATANDLFFSEQMPPFQYSAWIKAIHRFRHKPH
RFISKETNRLRQLFYEKRQTPLSFLPTEVFVPVKKGAVFKSPVFVWQGFLYLFITRLGRKRAPIRFSAVLQQVKLHIHEK
NISLRYECSEDCLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAEGVRSLQELIESDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=268834 BV11031_RS12360 WP_010329385.1 2284721..2285872(-) (coiA) [Bacillus vallismortis strain DSM 11031]
ATGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAGCCGAAAATTAAAGCGGGGACG
ATTCTTCTGCCCTGTGTGCGGGGGAGAGCTTGATGTGAAGCTCGGACTTCAAAAAGCGCCTCATTTCGCCCATAAACAGA
ACAAGTCCTGTTCGATAGAAGTAGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACATGCCTCTCCTGTATTAGAACCATATATCAAGAAAATCAAACAAAGACCTGACATCATGGCAAAGATTAAGGG
GCGCATGCTTGCGGTTGAATATCAATGTGCCACTCTCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCACACGAG
AAGAAATCTTCGTGCAATGGATTATGGGACAAAGCCGCTTAAAACGAACTGCTCCATCCTTTTATCAGTTTTCAGCTTTC
CATTGGCAATTTATCAATGTCAGTCCTTATAAATCCCTGATATGTTATTGCCCGGAAACGCGTTCGTTTAGCCGGCTCAG
CTGCATCATTCCGTTTTACGCGAACCATTCTTATTCCTCTGTTCAAACCATCCCTATCCATCGTGCAACTGCAAACGATC
TTTTTTTCAGTGAACAGATGCCCCCATTTCAATATTCCGCCTGGATAAAAGCCATTCACCGTTTTCGCCATAAACCCCAT
CGCTTCATCTCCAAGGAGACCAATCGCCTCAGGCAGCTGTTTTATGAGAAGCGGCAGACACCCCTTTCTTTTCTCCCGAC
TGAAGTGTTTGTCCCTGTGAAAAAAGGGGCTGTTTTTAAGAGCCCTGTTTTTGTGTGGCAGGGGTTTCTTTATCTGTTTA
TAACACGTCTTGGGCGTAAACGCGCGCCAATTCGCTTTTCAGCCGTTTTACAGCAGGTCAAACTGCACATTCATGAAAAG
AACATTTCACTCAGATACGAATGCAGCGAAGACTGTCTATCTGAAGCTGTTAAACAGTACATTGATTTCTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAACCAGCCTGCAGAGGGTGTACGCTCATTACAGGAACTCA
TAGAAAGTGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

83.914

97.389

0.817


Multiple sequence alignment