Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BV11031_RS10980 Genome accession   NZ_CP026362
Coordinates   2025744..2026208 (+) Length   154 a.a.
NCBI ID   WP_010328508.1    Uniprot ID   -
Organism   Bacillus vallismortis strain DSM 11031     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2020744..2031208
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV11031_RS10960 (BV11031_10955) fadH 2021930..2022694 (-) 765 WP_010328505.1 2,4-dienoyl-CoA reductase -
  BV11031_RS10965 (BV11031_10960) - 2022838..2023698 (+) 861 WP_010328506.1 metallophosphoesterase -
  BV11031_RS10970 (BV11031_10965) - 2023756..2024250 (+) 495 WP_082246298.1 L,D-transpeptidase family protein -
  BV11031_RS10975 (BV11031_10970) - 2024326..2025618 (+) 1293 WP_129550756.1 MFS transporter -
  BV11031_RS10980 (BV11031_10975) kre 2025744..2026208 (+) 465 WP_010328508.1 YkyB family protein Regulator
  BV11031_RS10985 (BV11031_10980) cheV 2026251..2027162 (-) 912 WP_010328509.1 chemotaxis protein CheV -
  BV11031_RS10990 (BV11031_10985) - 2027369..2027530 (+) 162 WP_010328510.1 hypothetical protein -
  BV11031_RS10995 (BV11031_10990) - 2027732..2028913 (+) 1182 WP_010328511.1 aminotransferase A -
  BV11031_RS11000 (BV11031_10995) kinA 2028923..2030743 (-) 1821 WP_121642475.1 sporulation histidine kinase KinA -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17899.69 Da        Isoelectric Point: 10.3545

>NTDB_id=268830 BV11031_RS10980 WP_010328508.1 2025744..2026208(+) (kre) [Bacillus vallismortis strain DSM 11031]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVANRQQPTYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=268830 BV11031_RS10980 WP_010328508.1 2025744..2026208(+) (kre) [Bacillus vallismortis strain DSM 11031]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCTAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACGAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAGGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTTGTGG
CAAATCGCCAGCAGCCAACTTATCATAAACCCGTCTTTAAAAAACTCGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

98.701

100

0.987

Multiple sequence alignment