Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BV11031_RS10875 Genome accession   NZ_CP026362
Coordinates   2008469..2009062 (-) Length   197 a.a.
NCBI ID   WP_010328488.1    Uniprot ID   A0AAP3FUR0
Organism   Bacillus vallismortis strain DSM 11031     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2003469..2014062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BV11031_RS10850 (BV11031_10845) mobB 2003866..2004387 (-) 522 WP_010328483.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  BV11031_RS10855 (BV11031_10850) glp 2004348..2005640 (-) 1293 WP_010328484.1 gephyrin-like molybdotransferase Glp -
  BV11031_RS10860 (BV11031_10855) - 2005658..2006677 (-) 1020 WP_010328485.1 molybdopterin-synthase adenylyltransferase MoeB -
  BV11031_RS10865 (BV11031_10860) - 2006728..2007327 (-) 600 WP_010328486.1 molybdenum cofactor guanylyltransferase -
  BV11031_RS10870 (BV11031_10865) - 2007463..2008428 (+) 966 WP_010328487.1 hypothetical protein -
  BV11031_RS10875 (BV11031_10870) rok 2008469..2009062 (-) 594 WP_010328488.1 transcriptional regulator Rok Regulator
  BV11031_RS10880 (BV11031_10875) - 2009517..2009969 (-) 453 WP_010328490.1 TlpA disulfide reductase family protein -
  BV11031_RS10885 (BV11031_10880) ahpA 2010037..2010579 (-) 543 WP_010328491.1 biofilm-specific peroxidase AhpA -
  BV11031_RS10890 (BV11031_10885) - 2010822..2011625 (+) 804 WP_010328492.1 mechanosensitive ion channel family protein -
  BV11031_RS10895 (BV11031_10890) - 2011741..2012891 (+) 1151 WP_128568192.1 IS3 family transposase -
  BV11031_RS10900 (BV11031_10895) - 2012953..2013198 (-) 246 WP_010328495.1 YkuS family protein -

Sequence

Protein


Download         Length: 197 a.a.        Molecular weight: 22417.48 Da        Isoelectric Point: 9.4946

>NTDB_id=268829 BV11031_RS10875 WP_010328488.1 2008469..2009062(-) (rok) [Bacillus vallismortis strain DSM 11031]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDLRSEKKPDSLPVLAELAAQEIRSYQPPS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESVEPAESTNE

Nucleotide


Download         Length: 594 bp        

>NTDB_id=268829 BV11031_RS10875 WP_010328488.1 2008469..2009062(-) (rok) [Bacillus vallismortis strain DSM 11031]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATCGAACGTGATAAAATATACGCAAAATTAAGAGAGTTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTAC
GTTCTGAAAAAAAACCAGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAGATCAGAAGCTATCAGCCGCCGTCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGTACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGAGAAGCTGCCATTAAAACTTTAAAGCGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTCATGCAA
AGCCTAATTAAAATGTATCCGGAAGTGAAAAAGCCGTATCGCGGCCAGTATATTTTAGAAGGCGAAATCGAATCTGCAGA
ATCAGTTGAACCTGCGGAATCAACAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

98.413

95.939

0.944

Multiple sequence alignment