Detailed information NTG0268330

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Aba810CP_RS08695
• Genome accession: NZ_CP026338
• Coordinates: 1780236..1780937 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594590.1
• Uniprot ID: A0A427R546
• Organism: Acinetobacter baumannii strain 810CP
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1775236..1785937

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Aba810CP_RS08660 (Aba810CP_08655)	kdsB	1775759..1776520 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
Aba810CP_RS08665 (Aba810CP_08660)	-	1776532..1777512 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
Aba810CP_RS08670 (Aba810CP_08665)	-	1777524..1777865 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
Aba810CP_RS08675 (Aba810CP_08670)	-	1777883..1778656 (+)	774	WP_000497301.1	TatD family hydrolase	-
Aba810CP_RS08680 (Aba810CP_08675)	-	1778694..1779302 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Aba810CP_RS08685 (Aba810CP_08680)	-	1779312..1779866 (+)	555	WP_000841373.1	type II secretion system protein	-
Aba810CP_RS08690 (Aba810CP_08685)	xcpV	1779856..1780236 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
Aba810CP_RS08695 (Aba810CP_08690)	xcpW	1780236..1780937 (+)	702	WP_000594590.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Aba810CP_RS08700 (Aba810CP_08695)	gspK	1780937..1781896 (+)	960	WP_000301471.1	type II secretion system minor pseudopilin GspK	-
Aba810CP_RS08705 (Aba810CP_08700)	-	1782127..1782723 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
Aba810CP_RS08710 (Aba810CP_08705)	ung	1782774..1783487 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
Aba810CP_RS08715 (Aba810CP_08710)	-	1783484..1784608 (+)	1125	WP_086241960.1	enoyl-CoA hydratase/isomerase family protein	-
Aba810CP_RS08720 (Aba810CP_08715)	tadA	1784615..1785118 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
Aba810CP_RS08725 (Aba810CP_08720)	-	1785188..1785631 (+)	444	WP_001246674.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26627.52 Da
• Isoelectric Point: 9.3468

>NTDB_id=268330 Aba810CP_RS08695 WP_000594590.1 1780236..1780937(+) (xcpW) [Acinetobacter baumannii strain 810CP]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWTYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=268330 Aba810CP_RS08695 WP_000594590.1 1780236..1780937(+) (xcpW) [Acinetobacter baumannii strain 810CP]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGACTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A427R546

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991