Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | Aba810CP_RS08690 | Genome accession | NZ_CP026338 |
| Coordinates | 1779856..1780236 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 810CP | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1774856..1785236
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| Aba810CP_RS08660 (Aba810CP_08655) | kdsB | 1775759..1776520 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| Aba810CP_RS08665 (Aba810CP_08660) | - | 1776532..1777512 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| Aba810CP_RS08670 (Aba810CP_08665) | - | 1777524..1777865 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| Aba810CP_RS08675 (Aba810CP_08670) | - | 1777883..1778656 (+) | 774 | WP_000497301.1 | TatD family hydrolase | - |
| Aba810CP_RS08680 (Aba810CP_08675) | - | 1778694..1779302 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| Aba810CP_RS08685 (Aba810CP_08680) | - | 1779312..1779866 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| Aba810CP_RS08690 (Aba810CP_08685) | xcpV | 1779856..1780236 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| Aba810CP_RS08695 (Aba810CP_08690) | xcpW | 1780236..1780937 (+) | 702 | WP_000594590.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| Aba810CP_RS08700 (Aba810CP_08695) | gspK | 1780937..1781896 (+) | 960 | WP_000301471.1 | type II secretion system minor pseudopilin GspK | - |
| Aba810CP_RS08705 (Aba810CP_08700) | - | 1782127..1782723 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| Aba810CP_RS08710 (Aba810CP_08705) | ung | 1782774..1783487 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| Aba810CP_RS08715 (Aba810CP_08710) | - | 1783484..1784608 (+) | 1125 | WP_086241960.1 | enoyl-CoA hydratase/isomerase family protein | - |
| Aba810CP_RS08720 (Aba810CP_08715) | tadA | 1784615..1785118 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=268329 Aba810CP_RS08690 WP_000836911.1 1779856..1780236(+) (xcpV) [Acinetobacter baumannii strain 810CP]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=268329 Aba810CP_RS08690 WP_000836911.1 1779856..1780236(+) (xcpV) [Acinetobacter baumannii strain 810CP]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |