Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C2859_RS17290 Genome accession   NZ_CP026334
Coordinates   3779369..3779770 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas citri pv. glycines strain EB08     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3774369..3784770
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2859_RS17275 (C2859_17170) - 3776383..3778419 (-) 2037 WP_003482481.1 methyl-accepting chemotaxis protein -
  C2859_RS17280 (C2859_17175) - 3778459..3778989 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  C2859_RS17285 (C2859_17180) - 3778989..3779351 (-) 363 WP_016849857.1 response regulator -
  C2859_RS17290 (C2859_17185) pilG 3779369..3779770 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  C2859_RS17295 (C2859_17190) gshB 3780007..3780957 (+) 951 WP_016849856.1 glutathione synthase -
  C2859_RS17300 (C2859_17195) - 3780954..3781829 (+) 876 WP_016849855.1 energy transducer TonB -
  C2859_RS17305 (C2859_17200) - 3781903..3782820 (-) 918 WP_016849854.1 ADP-ribosylglycohydrolase family protein -
  C2859_RS17310 (C2859_17205) tsaB 3782817..3783536 (-) 720 WP_003482499.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=268289 C2859_RS17290 WP_005913706.1 3779369..3779770(-) (pilG) [Xanthomonas citri pv. glycines strain EB08]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=268289 C2859_RS17290 WP_005913706.1 3779369..3779770(-) (pilG) [Xanthomonas citri pv. glycines strain EB08]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGATGACTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment