Detailed information NTG0268198

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: C2841_RS07920
• Genome accession: NZ_CP026325
• Coordinates: 1611231..1612670 (-)
• Length: 479 a.a.
• NCBI ID: WP_000749005.1
• Uniprot ID: A0AAC8N2R8
• Organism: Helicobacter pylori strain dRdM1
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1606231..1617670

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2841_RS07895 (C2841_07915)	recG	1607363..1609234 (-)	1872	WP_001158370.1	ATP-dependent DNA helicase RecG	-
C2841_RS07900 (C2841_07920)	-	1609316..1609663 (+)	348	WP_000837022.1	lipoprotein	-
C2841_RS07905 (C2841_07925)	-	1609667..1610302 (+)	636	WP_000765634.1	outer membrane protein	-
C2841_RS07910 (C2841_07930)	-	1610299..1611051 (-)	753	WP_000767556.1	exodeoxyribonuclease III	-
C2841_RS07920 (C2841_07940)	comH	1611231..1612670 (-)	1440	WP_000749005.1	hypothetical protein	Machinery gene
C2841_RS07925 (C2841_07945)	dnaA	1612899..1614272 (-)	1374	WP_000380647.1	chromosomal replication initiator protein DnaA	-
C2841_RS07930 (C2841_07950)	-	1614425..1614967 (+)	543	WP_000923009.1	hypothetical protein	-
C2841_RS07935 (C2841_07955)	-	1615010..1615249 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
C2841_RS07940 (C2841_07960)	glmS	1615250..1617043 (+)	1794	WP_000334435.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54783.74 Da
• Isoelectric Point: 7.0430

>NTDB_id=268198 C2841_RS07920 WP_000749005.1 1611231..1612670(-) (comH) [Helicobacter pylori strain dRdM1]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=268198 C2841_RS07920 WP_000749005.1 1611231..1612670(-) (comH) [Helicobacter pylori strain dRdM1]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAAAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACAACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAGCAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
GTGAAAACAATGAAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
AACTGCAACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATTAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAGCCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTATGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	100	100	1