Detailed information NTG0268176

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: C2842_RS07905
• Genome accession: NZ_CP026324
• Coordinates: 1607187..1608626 (-)
• Length: 479 a.a.
• NCBI ID: WP_000749005.1
• Uniprot ID: A0AAC8N2R8
• Organism: Helicobacter pylori strain 26695-dRdM2
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1602187..1613626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2842_RS07880 (C2842_07900)	recG	1603319..1605190 (-)	1872	WP_001158370.1	ATP-dependent DNA helicase RecG	-
C2842_RS07885 (C2842_07905)	-	1605272..1605619 (+)	348	WP_000837022.1	lipoprotein	-
C2842_RS07890 (C2842_07910)	-	1605623..1606258 (+)	636	WP_000765634.1	outer membrane protein	-
C2842_RS07895 (C2842_07915)	-	1606255..1607007 (-)	753	WP_000767556.1	exodeoxyribonuclease III	-
C2842_RS07905 (C2842_07925)	comH	1607187..1608626 (-)	1440	WP_000749005.1	hypothetical protein	Machinery gene
C2842_RS07910 (C2842_07930)	dnaA	1608855..1610228 (-)	1374	WP_000380647.1	chromosomal replication initiator protein DnaA	-
C2842_RS07915 (C2842_07935)	-	1610381..1610923 (+)	543	WP_000923009.1	hypothetical protein	-
C2842_RS07920 (C2842_07940)	-	1610966..1611205 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
C2842_RS07925 (C2842_07945)	glmS	1611206..1612999 (+)	1794	WP_000334435.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54783.74 Da
• Isoelectric Point: 7.0430

>NTDB_id=268176 C2842_RS07905 WP_000749005.1 1607187..1608626(-) (comH) [Helicobacter pylori strain 26695-dRdM2]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=268176 C2842_RS07905 WP_000749005.1 1607187..1608626(-) (comH) [Helicobacter pylori strain 26695-dRdM2]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAAAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACAACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAGCAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
GTGAAAACAATGAAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
AACTGCAACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATTAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAGCCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTATGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	100	100	1