Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | C1N51_RS19560 | Genome accession | NZ_CP026316 |
| Coordinates | 488497..489594 (+) | Length | 365 a.a. |
| NCBI ID | WP_038889042.1 | Uniprot ID | A0A812H8E7 |
| Organism | Vibrio campbellii strain BoB-90 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 483497..494594
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1N51_RS19530 (C1N51_19535) | - | 483740..484729 (+) | 990 | WP_103411354.1 | Gfo/Idh/MocA family protein | - |
| C1N51_RS19535 (C1N51_19540) | - | 484823..486160 (-) | 1338 | WP_103411355.1 | MATE family efflux transporter | - |
| C1N51_RS19540 (C1N51_19545) | - | 486284..486598 (-) | 315 | WP_005373603.1 | DUF496 family protein | - |
| C1N51_RS19545 (C1N51_19550) | - | 486837..487040 (+) | 204 | WP_005433391.1 | hypothetical protein | - |
| C1N51_RS19550 (C1N51_19555) | - | 487134..487787 (+) | 654 | WP_050920274.1 | YceH family protein | - |
| C1N51_RS19555 (C1N51_19560) | - | 487784..488098 (+) | 315 | WP_005433435.1 | GIY-YIG nuclease family protein | - |
| C1N51_RS19560 (C1N51_19565) | luxP | 488497..489594 (+) | 1098 | WP_038889042.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| C1N51_RS19565 (C1N51_19570) | luxQ | 489594..492173 (+) | 2580 | WP_103411356.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| C1N51_RS19570 (C1N51_19575) | - | 492286..492948 (-) | 663 | WP_045382063.1 | PilZ domain-containing protein | - |
| C1N51_RS19575 (C1N51_19580) | - | 493042..493968 (-) | 927 | WP_103411357.1 | DMT family transporter | - |
| C1N51_RS19580 (C1N51_19585) | - | 494118..494573 (+) | 456 | WP_041853553.1 | Lrp/AsnC family transcriptional regulator | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41451.79 Da Isoelectric Point: 5.4779
>NTDB_id=268102 C1N51_RS19560 WP_038889042.1 488497..489594(+) (luxP) [Vibrio campbellii strain BoB-90]
MKKALLFSLISMVGFSPASQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVREQPVPLSKPTKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN
MKKALLFSLISMVGFSPASQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVREQPVPLSKPTKRPLKISVVYPGQQVSD
YWVRNIAAFEKRLDKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=268102 C1N51_RS19560 WP_038889042.1 488497..489594(+) (luxP) [Vibrio campbellii strain BoB-90]
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTTTCTCCAGCGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAATTTCCCGAGCAACGAAATCTCACCAATGCTTTATCAGAAGCAGTACGAG
AACAGCCGGTCCCACTGTCTAAACCGACAAAACGTCCGCTTAAAATATCAGTGGTTTACCCAGGGCAGCAAGTTTCAGAT
TACTGGGTAAGAAATATTGCAGCATTCGAAAAACGTTTGGATAAGTTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCATTAATGGAAGCGCTCAAGAGCAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAACACCAAATTGATCTTGCAAAATATC
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
AGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGTGTGCTCTACTTTTCTGAAGGTTATATTAGCGACG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGTGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCAACC
AAGCAATCCGGCTATGATGCTGCGAAAGCGAGTTTAGCAAAACATCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
TGTGGCATTGGGTGCAGTAGACGCACTGGCCGAGTTGGGACGTGAAGACATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGACGCTATCCAGAAGGGTGATTTAGACATCACCGTCATGCGTATGAATGATGATACTGGCATAGCCATGGCA
GAAGCGATTAAGTGGGACCTGGAGGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAGCGCTGAAAAAGCGCGCATTTAGATATTCAGATAATTGA
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTTTCTCCAGCGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAATTTCCCGAGCAACGAAATCTCACCAATGCTTTATCAGAAGCAGTACGAG
AACAGCCGGTCCCACTGTCTAAACCGACAAAACGTCCGCTTAAAATATCAGTGGTTTACCCAGGGCAGCAAGTTTCAGAT
TACTGGGTAAGAAATATTGCAGCATTCGAAAAACGTTTGGATAAGTTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCATTAATGGAAGCGCTCAAGAGCAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAACACCAAATTGATCTTGCAAAATATC
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
AGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGTGTGCTCTACTTTTCTGAAGGTTATATTAGCGACG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGTGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCAACC
AAGCAATCCGGCTATGATGCTGCGAAAGCGAGTTTAGCAAAACATCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
TGTGGCATTGGGTGCAGTAGACGCACTGGCCGAGTTGGGACGTGAAGACATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGACGCTATCCAGAAGGGTGATTTAGACATCACCGTCATGCGTATGAATGATGATACTGGCATAGCCATGGCA
GAAGCGATTAAGTGGGACCTGGAGGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAGCGCTGAAAAAGCGCGCATTTAGATATTCAGATAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
63.462 |
99.726 |
0.633 |