Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | LWE_RS11220 | Genome accession | NC_008555 |
| Coordinates | 2241278..2243083 (-) | Length | 601 a.a. |
| NCBI ID | WP_011702959.1 | Uniprot ID | A0AKU1 |
| Organism | Listeria welshimeri serovar 6b str. SLCC5334 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2236278..2248083
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LWE_RS11200 (lwe2201) | isdE | 2237218..2238090 (-) | 873 | WP_011702955.1 | heme ABC transporter substrate-binding protein IsdE | - |
| LWE_RS11205 (lwe2202) | - | 2238177..2239901 (-) | 1725 | WP_011702956.1 | NEAT domain-containing protein | - |
| LWE_RS11210 (lwe2203) | isdC | 2239914..2240540 (-) | 627 | WP_011702957.1 | heme uptake protein IsdC | - |
| LWE_RS11215 (lwe2204) | - | 2240733..2240999 (-) | 267 | WP_011702958.1 | DUF3116 family protein | - |
| LWE_RS11220 (lwe2205) | pepF | 2241278..2243083 (-) | 1806 | WP_011702959.1 | oligoendopeptidase F | Regulator |
| LWE_RS11225 (lwe2206) | - | 2243156..2244271 (-) | 1116 | WP_011702960.1 | competence protein CoiA | - |
| LWE_RS11230 (lwe2207) | mecA | 2244397..2245050 (-) | 654 | WP_011702961.1 | adaptor protein MecA | - |
| LWE_RS11235 (lwe2208) | spxA | 2245272..2245667 (-) | 396 | WP_003720569.1 | transcriptional regulator SpxA | - |
| LWE_RS11240 (lwe2209) | - | 2245986..2246954 (-) | 969 | WP_011702962.1 | ABC transporter ATP-binding protein | - |
| LWE_RS11245 (lwe2210) | - | 2246951..2248027 (-) | 1077 | WP_003722316.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 601 a.a. Molecular weight: 68638.83 Da Isoelectric Point: 4.5491
>NTDB_id=26778 LWE_RS11220 WP_011702959.1 2241278..2243083(-) (pepF) [Listeria welshimeri serovar 6b str. SLCC5334]
MSKTNALPLREEVPEELTWDLTTIFPSDEAFEEAFLDLQKMTEESNQFKGRLAESSQILFEALQFRDKAYDLISNLYVYA
HLKMDQDTANAKYQGLYSRAGSLATKLMSALSYYDPEILAMDESVLKQFLNENKDLQLYAHLLEELNLSRPYILSEKEEA
LLANAGEVLGSSSNTFNTLNNADMKFPSIKDENGEEIEITHGRYGKLLESNDPRVRRDAFFGVYSVYEGLKNTLASTLNG
QVKKSNFYAATRGYKSAREAALSGNHIPETVYDALLNSVNTNANLLHRYVKLRKELLGLDELHMYDLYTPLSDDVNLEFT
YDEAKELVLEALKPLGEEYQSILKEAFDSRWIDVIENKGKRSGAYSSGSYSTSPYILLNWQDNINNVYTLAHELGHSVHS
YYTRKNQPFVYGDYSIFLAEVASTTNENLLTDYLLKKYDDPKVRAYLLNHYLDGFKGTVFRQTQFAEFEHAIHQADQNGT
ALTADYLTETYFDINKKYYGEDMVYDTEIGYEWSRIPHFYMNYYVFQYATGFSAASALSAKILLEGQEAVTAYIDFLKAG
SSDYPIEVLKKAGVDMTTPDPVNDALKVFEQRLDELEKLVK
MSKTNALPLREEVPEELTWDLTTIFPSDEAFEEAFLDLQKMTEESNQFKGRLAESSQILFEALQFRDKAYDLISNLYVYA
HLKMDQDTANAKYQGLYSRAGSLATKLMSALSYYDPEILAMDESVLKQFLNENKDLQLYAHLLEELNLSRPYILSEKEEA
LLANAGEVLGSSSNTFNTLNNADMKFPSIKDENGEEIEITHGRYGKLLESNDPRVRRDAFFGVYSVYEGLKNTLASTLNG
QVKKSNFYAATRGYKSAREAALSGNHIPETVYDALLNSVNTNANLLHRYVKLRKELLGLDELHMYDLYTPLSDDVNLEFT
YDEAKELVLEALKPLGEEYQSILKEAFDSRWIDVIENKGKRSGAYSSGSYSTSPYILLNWQDNINNVYTLAHELGHSVHS
YYTRKNQPFVYGDYSIFLAEVASTTNENLLTDYLLKKYDDPKVRAYLLNHYLDGFKGTVFRQTQFAEFEHAIHQADQNGT
ALTADYLTETYFDINKKYYGEDMVYDTEIGYEWSRIPHFYMNYYVFQYATGFSAASALSAKILLEGQEAVTAYIDFLKAG
SSDYPIEVLKKAGVDMTTPDPVNDALKVFEQRLDELEKLVK
Nucleotide
Download Length: 1806 bp
>NTDB_id=26778 LWE_RS11220 WP_011702959.1 2241278..2243083(-) (pepF) [Listeria welshimeri serovar 6b str. SLCC5334]
TTGAGTAAAACTAATGCATTACCTTTAAGAGAAGAAGTACCAGAAGAATTAACATGGGATTTAACAACTATTTTTCCGAG
TGATGAGGCTTTTGAAGAAGCTTTTCTTGATTTACAAAAAATGACAGAAGAAAGTAATCAATTTAAAGGTCGTTTAGCTG
AAAGTAGTCAAATTCTTTTTGAGGCACTTCAATTTCGGGATAAAGCTTATGATCTAATTAGTAATTTATATGTTTATGCA
CATTTGAAAATGGACCAAGATACTGCTAATGCAAAATATCAAGGTTTATATAGTCGTGCAGGAAGTTTAGCAACAAAATT
AATGTCGGCATTATCTTATTATGATCCAGAAATTTTAGCTATGGACGAAAGTGTTTTAAAGCAATTTTTAAATGAAAATA
AAGACTTGCAATTATATGCACATTTATTGGAAGAATTGAATCTCAGTCGACCTTATATTTTAAGTGAGAAGGAAGAAGCT
TTATTAGCCAATGCTGGTGAAGTTCTTGGGAGTTCTTCTAACACGTTTAATACGTTAAACAATGCAGATATGAAATTTCC
TTCTATTAAAGATGAGAATGGTGAAGAGATTGAAATTACTCATGGTCGATATGGTAAATTATTAGAGAGTAATGACCCAC
GTGTTCGCCGGGATGCTTTTTTTGGAGTATATTCCGTTTATGAAGGATTAAAGAATACATTAGCTTCTACTTTAAATGGA
CAAGTGAAAAAATCGAACTTTTATGCAGCTACTAGAGGGTATAAATCTGCTCGTGAAGCAGCACTTTCAGGTAATCATAT
TCCTGAAACTGTATATGATGCCTTACTAAACTCAGTGAACACTAATGCTAATTTACTTCATCGCTATGTGAAATTACGTA
AAGAGCTGTTAGGTTTAGATGAGTTGCATATGTATGATTTGTATACGCCGCTTTCAGATGATGTTAACTTGGAATTCACA
TACGATGAAGCCAAAGAACTGGTTCTTGAAGCGTTGAAGCCACTTGGAGAAGAATACCAATCTATTTTAAAAGAAGCATT
TGATAGTCGTTGGATTGATGTAATAGAAAATAAAGGTAAACGTAGTGGCGCGTATTCGTCTGGTTCTTATAGTACAAGTC
CATATATTTTACTGAATTGGCAAGATAATATTAATAATGTTTACACTCTTGCTCATGAACTTGGACATAGTGTGCATAGT
TATTATACAAGAAAAAATCAGCCTTTCGTTTATGGTGATTATTCTATTTTCTTAGCAGAGGTTGCATCTACGACGAATGA
AAATCTATTGACAGATTACCTTTTGAAAAAGTATGATGATCCAAAAGTCCGTGCCTATTTATTAAATCATTATTTAGACG
GATTTAAAGGGACTGTATTCCGTCAAACGCAATTTGCTGAATTTGAGCATGCTATTCACCAAGCAGATCAAAATGGTACG
GCATTGACTGCTGATTATCTAACAGAGACTTATTTTGATATTAATAAGAAATATTACGGCGAAGATATGGTTTATGATAC
TGAAATTGGTTATGAATGGTCTCGGATTCCACATTTCTATATGAATTATTACGTGTTCCAATATGCGACTGGTTTTTCAG
CAGCTTCTGCATTAAGTGCAAAAATTCTACTTGAAGGACAAGAAGCGGTAACAGCTTATATTGATTTCTTGAAAGCTGGT
AGTTCGGATTATCCTATTGAAGTTCTGAAAAAAGCAGGAGTAGATATGACAACTCCAGACCCAGTAAATGACGCATTAAA
AGTTTTTGAGCAAAGATTAGACGAACTAGAAAAATTAGTTAAATAA
TTGAGTAAAACTAATGCATTACCTTTAAGAGAAGAAGTACCAGAAGAATTAACATGGGATTTAACAACTATTTTTCCGAG
TGATGAGGCTTTTGAAGAAGCTTTTCTTGATTTACAAAAAATGACAGAAGAAAGTAATCAATTTAAAGGTCGTTTAGCTG
AAAGTAGTCAAATTCTTTTTGAGGCACTTCAATTTCGGGATAAAGCTTATGATCTAATTAGTAATTTATATGTTTATGCA
CATTTGAAAATGGACCAAGATACTGCTAATGCAAAATATCAAGGTTTATATAGTCGTGCAGGAAGTTTAGCAACAAAATT
AATGTCGGCATTATCTTATTATGATCCAGAAATTTTAGCTATGGACGAAAGTGTTTTAAAGCAATTTTTAAATGAAAATA
AAGACTTGCAATTATATGCACATTTATTGGAAGAATTGAATCTCAGTCGACCTTATATTTTAAGTGAGAAGGAAGAAGCT
TTATTAGCCAATGCTGGTGAAGTTCTTGGGAGTTCTTCTAACACGTTTAATACGTTAAACAATGCAGATATGAAATTTCC
TTCTATTAAAGATGAGAATGGTGAAGAGATTGAAATTACTCATGGTCGATATGGTAAATTATTAGAGAGTAATGACCCAC
GTGTTCGCCGGGATGCTTTTTTTGGAGTATATTCCGTTTATGAAGGATTAAAGAATACATTAGCTTCTACTTTAAATGGA
CAAGTGAAAAAATCGAACTTTTATGCAGCTACTAGAGGGTATAAATCTGCTCGTGAAGCAGCACTTTCAGGTAATCATAT
TCCTGAAACTGTATATGATGCCTTACTAAACTCAGTGAACACTAATGCTAATTTACTTCATCGCTATGTGAAATTACGTA
AAGAGCTGTTAGGTTTAGATGAGTTGCATATGTATGATTTGTATACGCCGCTTTCAGATGATGTTAACTTGGAATTCACA
TACGATGAAGCCAAAGAACTGGTTCTTGAAGCGTTGAAGCCACTTGGAGAAGAATACCAATCTATTTTAAAAGAAGCATT
TGATAGTCGTTGGATTGATGTAATAGAAAATAAAGGTAAACGTAGTGGCGCGTATTCGTCTGGTTCTTATAGTACAAGTC
CATATATTTTACTGAATTGGCAAGATAATATTAATAATGTTTACACTCTTGCTCATGAACTTGGACATAGTGTGCATAGT
TATTATACAAGAAAAAATCAGCCTTTCGTTTATGGTGATTATTCTATTTTCTTAGCAGAGGTTGCATCTACGACGAATGA
AAATCTATTGACAGATTACCTTTTGAAAAAGTATGATGATCCAAAAGTCCGTGCCTATTTATTAAATCATTATTTAGACG
GATTTAAAGGGACTGTATTCCGTCAAACGCAATTTGCTGAATTTGAGCATGCTATTCACCAAGCAGATCAAAATGGTACG
GCATTGACTGCTGATTATCTAACAGAGACTTATTTTGATATTAATAAGAAATATTACGGCGAAGATATGGTTTATGATAC
TGAAATTGGTTATGAATGGTCTCGGATTCCACATTTCTATATGAATTATTACGTGTTCCAATATGCGACTGGTTTTTCAG
CAGCTTCTGCATTAAGTGCAAAAATTCTACTTGAAGGACAAGAAGCGGTAACAGCTTATATTGATTTCTTGAAAGCTGGT
AGTTCGGATTATCCTATTGAAGTTCTGAAAAAAGCAGGAGTAGATATGACAACTCCAGACCCAGTAAATGACGCATTAAA
AGTTTTTGAGCAAAGATTAGACGAACTAGAAAAATTAGTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
51.182 |
98.502 |
0.504 |