Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   C2U49_RS01535 Genome accession   NZ_CP026178
Coordinates   315856..316452 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain KPNIH49     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 310856..321452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2U49_RS01510 (C2U49_01510) - 311047..312804 (-) 1758 WP_004147851.1 Lon protease family protein -
  C2U49_RS01515 (C2U49_01515) matP 312990..313442 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  C2U49_RS01520 (C2U49_01520) ompA 313575..314645 (-) 1071 WP_002898408.1 porin OmpA -
  C2U49_RS01525 (C2U49_01525) sulA 314998..315507 (-) 510 WP_004179215.1 SOS-induced cell division inhibitor SulA -
  C2U49_RS01530 (C2U49_01530) - 315550..315765 (-) 216 WP_009485781.1 hypothetical protein -
  C2U49_RS01535 (C2U49_01535) sxy/tfoX 315856..316452 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  C2U49_RS01540 (C2U49_01540) yccS 316466..318601 (-) 2136 WP_002898422.1 YccS family putative transporter -
  C2U49_RS01545 (C2U49_01545) - 318619..319065 (-) 447 WP_002898425.1 YccF domain-containing protein -
  C2U49_RS01550 (C2U49_01550) helD 319190..321244 (+) 2055 WP_040236859.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=267761 C2U49_RS01535 WP_004179217.1 315856..316452(+) (sxy/tfoX) [Klebsiella pneumoniae strain KPNIH49]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=267761 C2U49_RS01535 WP_004179217.1 315856..316452(+) (sxy/tfoX) [Klebsiella pneumoniae strain KPNIH49]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCCACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51

Multiple sequence alignment