Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | LPC_RS14705 | Genome accession | NC_009494 |
| Coordinates | 3283384..3283977 (+) | Length | 197 a.a. |
| NCBI ID | WP_011216607.1 | Uniprot ID | Q5WT52 |
| Organism | Legionella pneumophila str. Corby | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3278384..3288977
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPC_RS14695 (LPC_3037) | dnaX | 3281333..3283003 (+) | 1671 | WP_011947649.1 | DNA polymerase III subunit gamma/tau | - |
| LPC_RS14700 (LPC_3038) | - | 3283037..3283375 (+) | 339 | WP_011216606.1 | YbaB/EbfC family nucleoid-associated protein | - |
| LPC_RS14705 (LPC_3039) | recR | 3283384..3283977 (+) | 594 | WP_011216607.1 | recombination mediator RecR | Machinery gene |
| LPC_RS14710 (LPC_3040) | - | 3283970..3284830 (+) | 861 | WP_011947650.1 | DUF547 domain-containing protein | - |
| LPC_RS14715 (LPC_3041) | - | 3284827..3286824 (+) | 1998 | WP_011947651.1 | sulfatase-like hydrolase/transferase | - |
| LPC_RS14720 (LPC_3042) | - | 3286929..3288407 (-) | 1479 | WP_011947652.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21705.01 Da Isoelectric Point: 6.6782
>NTDB_id=26758 LPC_RS14705 WP_011216607.1 3283384..3283977(+) (recR) [Legionella pneumophila str. Corby]
MDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQTLCTLCQNPNRDSTLLC
VVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPKLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDE
TVNISQLAHGIPSGGELEFLDGNTISSALKNRAVINV
MDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQTLCTLCQNPNRDSTLLC
VVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPKLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDE
TVNISQLAHGIPSGGELEFLDGNTISSALKNRAVINV
Nucleotide
Download Length: 594 bp
>NTDB_id=26758 LPC_RS14705 WP_011216607.1 3283384..3283977(+) (recR) [Legionella pneumophila str. Corby]
ATGGATGCTCTAAGCCGCTTGGTAGAGGCGCTTCGCTGTCTTCCCGGTGTGGGACCAAAATCAGCACAAAGGATGGTGTT
CCATTTATTGCAGCACCAAAGACAGCGAGGTTTACACCTTGCCTCCTGTTTGGAACAGGCAATGAAGCACATTAGTCATT
GCCAGCAGTGTAATAATTACACTGAACAAACTCTGTGTACTCTTTGCCAAAACCCCAATCGGGATTCAACATTACTTTGC
GTGGTAGAGAGTCCAGCGGATGTTTCTGCCATAGAACAAAGCAATTCCTTTCAAGGTAAATATTTTGTCCTTATGGGAAA
AATTTCTCCTCTTGATGGCTTGGGACCTGATGACATAGGGCTACCGAAACTTAAGGAGTTAATTATTAGGGAAAAAATTC
AGGAAGTTATTCTTGCATTAAGCCCCAGTGTTGAAAGCCAGACCACAATTCATTTTATTCATCAGTTGCTAAAGGATGAA
ACCGTCAATATCAGTCAGTTAGCACATGGAATACCATCAGGTGGTGAATTAGAATTTTTAGATGGGAATACTATAAGCAG
TGCCCTTAAGAACAGAGCTGTGATTAATGTTTAA
ATGGATGCTCTAAGCCGCTTGGTAGAGGCGCTTCGCTGTCTTCCCGGTGTGGGACCAAAATCAGCACAAAGGATGGTGTT
CCATTTATTGCAGCACCAAAGACAGCGAGGTTTACACCTTGCCTCCTGTTTGGAACAGGCAATGAAGCACATTAGTCATT
GCCAGCAGTGTAATAATTACACTGAACAAACTCTGTGTACTCTTTGCCAAAACCCCAATCGGGATTCAACATTACTTTGC
GTGGTAGAGAGTCCAGCGGATGTTTCTGCCATAGAACAAAGCAATTCCTTTCAAGGTAAATATTTTGTCCTTATGGGAAA
AATTTCTCCTCTTGATGGCTTGGGACCTGATGACATAGGGCTACCGAAACTTAAGGAGTTAATTATTAGGGAAAAAATTC
AGGAAGTTATTCTTGCATTAAGCCCCAGTGTTGAAAGCCAGACCACAATTCATTTTATTCATCAGTTGCTAAAGGATGAA
ACCGTCAATATCAGTCAGTTAGCACATGGAATACCATCAGGTGGTGAATTAGAATTTTTAGATGGGAATACTATAAGCAG
TGCCCTTAAGAACAGAGCTGTGATTAATGTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
40.513 |
98.985 |
0.401 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
39.267 |
96.954 |
0.381 |