Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   C0971_RS04715 Genome accession   NZ_CP026143
Coordinates   927787..928737 (+) Length   316 a.a.
NCBI ID   WP_248893123.1    Uniprot ID   -
Organism   Bacillus methanolicus strain DFS2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 922787..933737
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0971_RS04700 (C0971_04755) - 925552..925734 (-) 183 WP_004433583.1 YjzD family protein -
  C0971_RS04705 (C0971_04760) - 925938..926675 (+) 738 WP_248893119.1 hydrolase -
  C0971_RS04710 (C0971_04765) - 926756..927619 (+) 864 WP_248893121.1 hypothetical protein -
  C0971_RS04715 (C0971_04770) med 927787..928737 (+) 951 WP_248893123.1 BMP family ABC transporter substrate-binding protein Regulator
  C0971_RS04720 (C0971_04775) - 928796..929098 (-) 303 WP_248893125.1 hypothetical protein -
  C0971_RS04725 (C0971_04780) - 929314..930246 (+) 933 WP_248893127.1 beta-ketoacyl-ACP synthase III -
  C0971_RS04730 (C0971_04785) fabF 930518..931759 (+) 1242 WP_248893130.1 beta-ketoacyl-ACP synthase II -
  C0971_RS04735 (C0971_04790) - 932014..932667 (+) 654 WP_248893133.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35487.38 Da        Isoelectric Point: 5.7051

>NTDB_id=267506 C0971_RS04715 WP_248893123.1 927787..928737(+) (med) [Bacillus methanolicus strain DFS2]
MLKRFGVILLCLLVLAGCEQPTKTGKLKKVGLLVPDTVNDQVWGTKGYKGMLKIQSRFNVDVYIKEGMNSEIRVERAVKE
FDQKGVNLIFGHGNEYAEYFNKISKNYPNIHFVSFNGDAKNKNTTSLNFQAYAMGFFGGMVASHMTKKNKVGIIAAYEWQ
PEVEGFYEGAKFENKHVDVNIQYVGQWDDDQTAMTILDNMIKTGVDVVYPAGDGYNVPVIEKAKEQGLFAIGYISDESDL
GKSTVLTSTIQHVDKLYELVAEQYNNGKLKSGNLHFDFKDGVISLGEFSPLIDDEFKAEINSYIEDYKKTGKLPNE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=267506 C0971_RS04715 WP_248893123.1 927787..928737(+) (med) [Bacillus methanolicus strain DFS2]
ATGTTAAAACGTTTCGGAGTCATTCTTTTATGTCTTCTTGTATTGGCTGGATGTGAGCAGCCGACCAAAACTGGTAAATT
AAAAAAAGTAGGTTTGCTTGTGCCTGATACAGTAAACGACCAGGTTTGGGGAACAAAAGGATATAAAGGAATGCTGAAAA
TCCAATCTCGTTTTAACGTAGATGTTTATATTAAAGAAGGGATGAATTCTGAAATAAGAGTAGAACGAGCCGTAAAAGAA
TTTGACCAAAAAGGAGTCAATTTAATTTTCGGGCACGGGAATGAATACGCTGAGTATTTTAATAAAATTTCAAAAAATTA
TCCGAATATTCATTTCGTTAGTTTTAATGGCGACGCTAAAAATAAAAATACAACAAGTTTAAATTTCCAAGCCTATGCGA
TGGGTTTTTTTGGTGGGATGGTAGCTTCTCATATGACAAAAAAGAACAAGGTAGGAATCATTGCAGCTTATGAATGGCAG
CCAGAAGTTGAAGGTTTTTATGAAGGTGCGAAATTTGAAAATAAACATGTGGACGTAAATATCCAATATGTTGGCCAATG
GGATGATGACCAGACAGCAATGACAATTTTAGACAATATGATTAAGACTGGTGTGGATGTCGTTTATCCTGCCGGTGATG
GCTATAACGTTCCGGTTATTGAAAAAGCCAAAGAGCAGGGACTTTTTGCAATCGGCTATATATCTGATGAATCCGACCTT
GGCAAATCAACAGTTTTGACAAGTACAATTCAGCATGTTGATAAGCTTTACGAATTAGTAGCAGAACAATATAACAACGG
TAAACTCAAATCCGGAAATCTACATTTTGATTTTAAAGATGGAGTCATTTCTCTAGGGGAGTTCAGTCCACTGATAGATG
ATGAATTTAAAGCTGAAATAAATTCGTATATTGAAGATTATAAAAAAACCGGAAAACTTCCAAATGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

54.777

99.367

0.544

Multiple sequence alignment