Detailed information NTG0267363

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: C2U32_RS04280
• Genome accession: NZ_CP026125
• Coordinates: 835799..836500 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594587.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ABNIH28
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 830799..841500

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2U32_RS04245 (C2U32_04240)	kdsB	831322..832083 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
C2U32_RS04250 (C2U32_04245)	-	832095..833075 (+)	981	WP_001075420.1	DNA polymerase III subunit delta'	-
C2U32_RS04255 (C2U32_04250)	-	833087..833428 (+)	342	WP_001183025.1	PilZ domain-containing protein	-
C2U32_RS04260 (C2U32_04255)	-	833446..834219 (+)	774	WP_000497295.1	TatD family hydrolase	-
C2U32_RS04265 (C2U32_04260)	-	834257..834865 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
C2U32_RS04270 (C2U32_04265)	-	834875..835429 (+)	555	WP_000841378.1	type II secretion system protein	-
C2U32_RS04275 (C2U32_04270)	xcpV	835419..835799 (+)	381	WP_000836906.1	type II secretion system minor pseudopilin GspI	Machinery gene
C2U32_RS04280 (C2U32_04275)	xcpW	835799..836500 (+)	702	WP_000594587.1	type II secretion system minor pseudopilin GspJ	Machinery gene
C2U32_RS04285 (C2U32_04280)	gspK	836500..837459 (+)	960	WP_000301463.1	type II secretion system minor pseudopilin GspK	-
C2U32_RS04290 (C2U32_04285)	-	837689..838285 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
C2U32_RS04295 (C2U32_04290)	ung	838336..839049 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
C2U32_RS04300 (C2U32_04295)	-	839046..840170 (+)	1125	WP_086384405.1	enoyl-CoA hydratase/isomerase family protein	-
C2U32_RS04305 (C2U32_04300)	tadA	840177..840680 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
C2U32_RS04310 (C2U32_04305)	-	840750..841193 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26681.66 Da
• Isoelectric Point: 9.3468

>NTDB_id=267363 C2U32_RS04280 WP_000594587.1 835799..836500(+) (xcpW) [Acinetobacter baumannii strain ABNIH28]
MIKNKYIHIRSIASRLAARSSSARLTRVSGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQDDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=267363 C2U32_RS04280 WP_000594587.1 835799..836500(+) (xcpW) [Acinetobacter baumannii strain ABNIH28]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGTCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGATGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991