Detailed information    

insolico Bioinformatically predicted

Overview


Name   irvR   Type   Regulator
Locus tag   DZU27_RS09170 Genome accession   NZ_CP031625
Coordinates   1805431..1806198 (-) Length   255 a.a.
NCBI ID   WP_003058809.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS28533     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1800431..1811198
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DZU27_RS09155 (DZU27_09145) hexB 1800949..1802931 (-) 1983 WP_021340699.1 DNA mismatch repair endonuclease MutL Machinery gene
  DZU27_RS09160 (DZU27_09150) - 1803026..1804177 (-) 1152 WP_003058754.1 site-specific integrase -
  DZU27_RS09975 (DZU27_09155) - 1804426..1804569 (+) 144 WP_011185066.1 putative holin-like toxin -
  DZU27_RS09170 (DZU27_09160) irvR 1805431..1806198 (-) 768 WP_003058809.1 S24 family peptidase Regulator
  DZU27_RS09175 (DZU27_09165) - 1806352..1806558 (+) 207 WP_002992503.1 helix-turn-helix transcriptional regulator -
  DZU27_RS09180 (DZU27_09170) - 1806592..1806765 (+) 174 Protein_1708 helix-turn-helix transcriptional regulator -
  DZU27_RS09185 (DZU27_09175) - 1806813..1807220 (+) 408 WP_002992501.1 hypothetical protein -
  DZU27_RS09980 - 1807233..1807355 (+) 123 WP_011285272.1 hypothetical protein -
  DZU27_RS09190 (DZU27_09180) - 1807638..1808159 (+) 522 WP_002992498.1 Rha family transcriptional regulator -
  DZU27_RS09195 (DZU27_09185) - 1808407..1808580 (+) 174 WP_000132665.1 hypothetical protein -
  DZU27_RS09200 (DZU27_09190) - 1808798..1808971 (+) 174 WP_000074663.1 hypothetical protein -
  DZU27_RS09205 (DZU27_09195) - 1809133..1809564 (+) 432 WP_136302445.1 hypothetical protein -
  DZU27_RS09210 (DZU27_09200) - 1809666..1809998 (+) 333 WP_011285276.1 hypothetical protein -
  DZU27_RS09215 (DZU27_09205) - 1809998..1810189 (+) 192 WP_021340709.1 hypothetical protein -
  DZU27_RS09220 (DZU27_09210) - 1810201..1810530 (+) 330 WP_003058810.1 hypothetical protein -
  DZU27_RS09225 (DZU27_09215) - 1810533..1810805 (+) 273 WP_010922766.1 hypothetical protein -

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 28725.00 Da        Isoelectric Point: 4.3544

>NTDB_id=267316 DZU27_RS09170 WP_003058809.1 1805431..1806198(-) (irvR) [Streptococcus pyogenes strain MGAS28533]
MAKNSPQDLINREIFSTNLNMLMAKKNIKQIDIHNKLGIPKSTITGYVKGRSLPTAGNVQKLADFFGVLKSDIDPRFDSN
NIETNSNIIPSTLQKVTSTLSQLEHKRQLNVLDYAETQLEQQNTVEEPQATYYTYNYYDHAASAGTGQYLNDVQVETIEL
PVDYDADFVIPVYGDSMEPEYHSGDYVFIKLSINLSDGDIGVFEYYGDAYIKQLVINDSGAFLHSLNDKYDDILIDRDSD
FRIIGEVIGSFTSKS

Nucleotide


Download         Length: 768 bp        

>NTDB_id=267316 DZU27_RS09170 WP_003058809.1 1805431..1806198(-) (irvR) [Streptococcus pyogenes strain MGAS28533]
ATGGCTAAAAATAGTCCCCAAGATTTAATAAATAGAGAAATTTTCTCAACAAATCTCAACATGCTTATGGCTAAAAAGAA
TATCAAACAGATAGATATTCACAACAAACTAGGAATACCTAAGAGTACGATAACTGGCTATGTTAAAGGTCGTTCACTCC
CAACTGCTGGAAACGTTCAAAAGCTGGCGGACTTCTTCGGAGTTCTAAAATCAGACATTGACCCCCGTTTTGATTCTAAT
AATATTGAAACAAATAGTAATATTATCCCATCAACCCTACAAAAAGTAACATCTACTTTATCTCAGCTAGAACACAAGCG
ACAATTAAACGTCCTTGATTATGCTGAAACACAATTAGAACAACAAAACACAGTAGAAGAACCACAAGCCACCTACTACA
CTTACAACTACTACGACCACGCAGCTTCAGCTGGTACAGGTCAGTATCTAAATGATGTACAAGTAGAAACAATTGAATTA
CCAGTCGATTACGACGCTGATTTTGTCATACCGGTTTATGGCGATTCTATGGAACCCGAATACCATTCTGGGGACTATGT
ATTTATCAAACTATCTATTAACCTGTCAGATGGTGATATAGGAGTTTTTGAGTATTACGGTGATGCTTATATCAAACAAC
TTGTTATAAACGATTCTGGAGCGTTTCTGCATAGTCTGAACGACAAGTATGACGATATACTCATAGATAGAGATAGTGAT
TTCCGTATTATCGGAGAAGTTATTGGGAGTTTTACATCTAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

34

100

0.4