Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | C2U64_RS03015 | Genome accession | NZ_CP026089 |
| Coordinates | 394892..395533 (+) | Length | 213 a.a. |
| NCBI ID | WP_002116944.1 | Uniprot ID | A0A009RUZ9 |
| Organism | Acinetobacter pittii strain WCHAP005069 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 389892..400533
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2U64_RS02995 (C2U64_03000) | - | 389898..390230 (+) | 333 | WP_002116981.1 | DUF7709 family protein | - |
| C2U64_RS03000 (C2U64_03005) | rrmA | 390233..391057 (+) | 825 | WP_002117059.1 | putative RNA methyltransferase | - |
| C2U64_RS03005 (C2U64_03010) | ponA | 391112..393673 (-) | 2562 | WP_148251477.1 | penicillin-binding protein PBP1a | - |
| C2U64_RS03010 (C2U64_03015) | pilM | 393834..394892 (+) | 1059 | WP_031945632.1 | pilus assembly protein PilM | Machinery gene |
| C2U64_RS03015 (C2U64_03020) | pilN | 394892..395533 (+) | 642 | WP_002116944.1 | PilN domain-containing protein | Machinery gene |
| C2U64_RS03020 (C2U64_03025) | pilO | 395530..396282 (+) | 753 | WP_002116684.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| C2U64_RS03025 (C2U64_03030) | pilP | 396293..396820 (+) | 528 | WP_002116864.1 | pilus assembly protein PilP | Machinery gene |
| C2U64_RS03030 (C2U64_03035) | pilQ | 396883..399048 (+) | 2166 | WP_002116833.1 | type IV pilus secretin PilQ | Machinery gene |
| C2U64_RS03035 (C2U64_03040) | aroK | 399060..399629 (+) | 570 | WP_002116987.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 23921.36 Da Isoelectric Point: 5.4186
>NTDB_id=266999 C2U64_RS03015 WP_002116944.1 394892..395533(+) (pilN) [Acinetobacter pittii strain WCHAP005069]
MATINLLPWRDGLREQRKKQFIILCFGVVVLGITTVFAGWFYLNQKLNDQEQANQLIISTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPAAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMSSFLA
TEEKKDKAISSLLPRVEDSYGSFVVTVDVGEMGVTTTDDTANTSVGTDKEAAK
MATINLLPWRDGLREQRKKQFIILCFGVVVLGITTVFAGWFYLNQKLNDQEQANQLIISTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPAAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMSSFLA
TEEKKDKAISSLLPRVEDSYGSFVVTVDVGEMGVTTTDDTANTSVGTDKEAAK
Nucleotide
Download Length: 642 bp
>NTDB_id=266999 C2U64_RS03015 WP_002116944.1 394892..395533(+) (pilN) [Acinetobacter pittii strain WCHAP005069]
ATGGCAACAATTAATTTACTCCCTTGGCGTGATGGGCTTAGGGAGCAGCGTAAAAAACAATTTATTATTTTATGTTTTGG
GGTCGTTGTTTTGGGGATAACCACTGTATTTGCAGGGTGGTTTTATTTGAATCAAAAATTAAATGATCAAGAACAAGCAA
ATCAGCTCATCATCAGTACAAACCAGAATCTAGATCAACAACTTAAAACCTTAAATGGCTTGCAAGAACAGCGGGATGCA
ATTATTGAGCGTATGAAGCTCATTCAAGGTTTGCAAAGCCAGCGTCCGGTCGTTGTACGTTTGGTGGATGAATTAGTACG
TGTGACCCCGGCAGCCATGTATTTGACTAAATTCAGTCGAACCGGAGATAAATTTACGATTGAAGGTAAAGCGGAAAGTC
CAAATACGGTTGCAGAATTATTACGTAATCTCGAAGCATCGCCATGGTATCGCAACGCTTTTATGAGTTCTTTCTTGGCG
ACCGAAGAGAAAAAAGATAAGGCTATCAGTTCTTTGCTTCCTAGAGTTGAAGATAGCTATGGCAGTTTTGTTGTTACTGT
TGATGTAGGGGAAATGGGTGTGACTACAACAGATGATACCGCCAATACGTCTGTAGGTACGGATAAGGAGGCGGCAAAAT
GA
ATGGCAACAATTAATTTACTCCCTTGGCGTGATGGGCTTAGGGAGCAGCGTAAAAAACAATTTATTATTTTATGTTTTGG
GGTCGTTGTTTTGGGGATAACCACTGTATTTGCAGGGTGGTTTTATTTGAATCAAAAATTAAATGATCAAGAACAAGCAA
ATCAGCTCATCATCAGTACAAACCAGAATCTAGATCAACAACTTAAAACCTTAAATGGCTTGCAAGAACAGCGGGATGCA
ATTATTGAGCGTATGAAGCTCATTCAAGGTTTGCAAAGCCAGCGTCCGGTCGTTGTACGTTTGGTGGATGAATTAGTACG
TGTGACCCCGGCAGCCATGTATTTGACTAAATTCAGTCGAACCGGAGATAAATTTACGATTGAAGGTAAAGCGGAAAGTC
CAAATACGGTTGCAGAATTATTACGTAATCTCGAAGCATCGCCATGGTATCGCAACGCTTTTATGAGTTCTTTCTTGGCG
ACCGAAGAGAAAAAAGATAAGGCTATCAGTTCTTTGCTTCCTAGAGTTGAAGATAGCTATGGCAGTTTTGTTGTTACTGT
TGATGTAGGGGAAATGGGTGTGACTACAACAGATGATACCGCCAATACGTCTGTAGGTACGGATAAGGAGGCGGCAAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
89.202 |
100 |
0.892 |
| comN | Acinetobacter baylyi ADP1 |
71.569 |
95.775 |
0.685 |