Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   C2E56_RS02300 Genome accession   NZ_CP026084
Coordinates   399514..400239 (+) Length   241 a.a.
NCBI ID   WP_000912307.1    Uniprot ID   A0AAV3JGZ9
Organism   Streptococcus agalactiae strain NJ1606     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 394514..405239
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2E56_RS02265 (C2E56_02350) tsaE 395316..395759 (+) 444 WP_032459127.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  C2E56_RS02270 (C2E56_02355) - 395752..396273 (+) 522 WP_017647017.1 GNAT family N-acetyltransferase -
  C2E56_RS02275 (C2E56_02360) brpA 396282..397589 (+) 1308 WP_000708160.1 biofilm formation/cell division transcriptional regulator BrpA -
  C2E56_RS02280 (C2E56_02365) - 397653..397949 (-) 297 WP_017647018.1 hypothetical protein -
  C2E56_RS02285 (C2E56_02370) - 397946..398365 (-) 420 WP_017647019.1 HIT family protein -
  C2E56_RS02290 (C2E56_02375) - 398701..399204 (+) 504 WP_017647020.1 hypothetical protein -
  C2E56_RS02295 (C2E56_02380) - 399256..399442 (-) 187 Protein_380 hypothetical protein -
  C2E56_RS02300 (C2E56_02385) pptA 399514..400239 (+) 726 WP_000912307.1 ABC transporter ATP-binding protein Regulator
  C2E56_RS02305 (C2E56_02390) pptB 400241..401275 (+) 1035 WP_017647021.1 ABC transporter permease Regulator
  C2E56_RS02310 (C2E56_02395) ccrZ 401333..402133 (+) 801 WP_000155919.1 cell cycle regulator CcrZ -
  C2E56_RS02315 (C2E56_02400) trmB 402123..402758 (+) 636 WP_017647022.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  C2E56_RS02325 (C2E56_02410) rimP 403249..403725 (+) 477 WP_047210184.1 ribosome maturation factor RimP -
  C2E56_RS02330 (C2E56_02415) nusA 403761..404912 (+) 1152 WP_000032295.1 transcription termination factor NusA -
  C2E56_RS02335 (C2E56_02420) rnpM 404934..405230 (+) 297 WP_001140526.1 RNase P modulator RnpM -

Sequence


Protein


Download         Length: 241 a.a.        Molecular weight: 26835.26 Da        Isoelectric Point: 4.5704

>NTDB_id=266939 C2E56_RS02300 WP_000912307.1 399514..400239(+) (pptA) [Streptococcus agalactiae strain NJ1606]
MLKIENVTGGYVNIPVLKNISFEVNDGELVGLIGLNGAGKSTTINEIIGILRPYQGDITIDGISLEADQELYRKKIGFIP
ETPSLYEELTLREHLETVAMAYDIATDEVMARAQKLLEMFRLTDKLDWFPMHFSKGMKQKVMIICAFVVSPSLFIVDEPF
LGLDPLAISDLINLLAEEKAKGKSILMSTHVLDSAEKMCDRFVILHKGEIRAVGTLEELRAIFGDSNANLNDIYIALTKE
V

Nucleotide


Download         Length: 726 bp        

>NTDB_id=266939 C2E56_RS02300 WP_000912307.1 399514..400239(+) (pptA) [Streptococcus agalactiae strain NJ1606]
ATGTTAAAAATTGAAAATGTTACAGGGGGGTATGTTAATATCCCAGTTTTAAAAAATATTTCTTTTGAAGTAAATGATGG
AGAGTTAGTTGGATTAATTGGGCTTAATGGTGCAGGAAAATCAACCACTATTAACGAGATTATTGGTATTTTGAGACCCT
ATCAAGGAGATATTACAATTGATGGTATTAGTCTTGAAGCCGACCAAGAACTTTATAGAAAGAAAATAGGCTTTATTCCT
GAAACACCAAGTCTCTATGAGGAACTAACTCTCAGGGAACATTTAGAAACGGTAGCTATGGCGTATGATATTGCCACCGA
TGAAGTTATGGCACGTGCGCAAAAACTATTAGAGATGTTTCGTCTAACAGATAAATTAGACTGGTTTCCAATGCATTTTT
CAAAGGGAATGAAACAAAAGGTTATGATTATTTGTGCTTTTGTTGTATCTCCAAGTTTATTTATTGTTGATGAACCATTT
TTAGGTTTGGATCCACTAGCTATTTCAGATTTGATTAATCTTCTAGCAGAAGAAAAAGCTAAAGGGAAATCTATTTTGAT
GTCAACACACGTATTAGATTCTGCCGAAAAAATGTGTGATCGTTTTGTTATTTTACATAAAGGAGAAATACGGGCAGTTG
GAACCCTAGAGGAATTACGGGCTATTTTTGGAGACAGTAATGCTAATTTAAATGACATCTACATAGCTCTGACAAAAGAG
GTGTGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

77.824

99.17

0.772

  pptA Streptococcus salivarius strain HSISS4

77.406

99.17

0.768


Multiple sequence alignment