Detailed information NTG0026688

Bioinformatically predicted

Overview

• Name: HI0659
• Type: Machinery gene
• Locus tag: SPD_RS02735
• Genome accession: NC_008533
• Coordinates: 518950..519216 (+)
• Length: 88 a.a.
• NCBI ID: WP_001819358.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae D39
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	518377..518679	518950..519216	flank	271

Gene organization within MGE regions

Location: 518377..519216

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPD_RS02730 (SPD_0508)	-	518377..518824 (+)	448	Protein_513	IS30 family transposase	-
SPD_RS02735 (SPD_0509)	HI0659	518950..519216 (+)	267	WP_001819358.1	helix-turn-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9667.20 Da
• Isoelectric Point: 4.6537

>NTDB_id=26688 SPD_RS02735 WP_001819358.1 518950..519216(+) (HI0659) [Streptococcus pneumoniae D39]
MEGCPSELFSKEEILESDMRVAIMSELIEARYEQGISQKKLEEVSGISQPVIARMETGKTSPQLDTVLKVLASLGKTLAV
VRLEQGKS

Nucleotide

• Length: 267 bp

>NTDB_id=26688 SPD_RS02735 WP_001819358.1 518950..519216(+) (HI0659) [Streptococcus pneumoniae D39]
TTGGAAGGATGTCCATCTGAGCTCTTTAGCAAGGAGGAAATCCTTGAAAGTGATATGCGAGTGGCTATCATGAGCGAGTT
GATTGAGGCTAGGTATGAACAAGGAATCAGTCAGAAAAAGCTGGAAGAAGTCAGTGGAATAAGCCAGCCTGTCATAGCTA
GGATGGAGACAGGAAAGACTAGTCCTCAGTTGGATACAGTCTTAAAAGTCCTAGCCAGTTTAGGAAAGACACTAGCAGTC
GTCCGACTTGAACAGGGAAAAAGTTGA

Domains

Predicted by InterproScan.

• Helix-turn-helix (HTH_3) (29-79)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
HI0659	Haemophilus influenzae Rd KW20	58.442	87.5	0.511