Detailed information NTG0266877

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: C2E46_RS01040
• Genome accession: NZ_CP026082
• Coordinates: 170653..171585 (+)
• Length: 310 a.a.
• NCBI ID: WP_000138507.1
• Uniprot ID: A0AAD3A4P4
• Organism: Streptococcus agalactiae strain YZ1605
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 165653..176585

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2E46_RS01020 (C2E46_01030)	-	165865..167520 (+)	1656	WP_017643615.1	peptide ABC transporter substrate-binding protein	-
C2E46_RS01025 (C2E46_01035)	-	167639..168553 (+)	915	WP_000598965.1	ABC transporter permease	-
C2E46_RS01030 (C2E46_01040)	-	168563..169594 (+)	1032	WP_000764052.1	ABC transporter permease	-
C2E46_RS01035 (C2E46_01045)	oppD	169607..170653 (+)	1047	WP_000410290.1	ABC transporter ATP-binding protein	Regulator
C2E46_RS01040 (C2E46_01050)	amiF	170653..171585 (+)	933	WP_000138507.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34845.63 Da
• Isoelectric Point: 6.7314

>NTDB_id=266877 C2E46_RS01040 WP_000138507.1 170653..171585(+) (amiF) [Streptococcus agalactiae strain YZ1605]
MTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNNPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPGHFVLSTSQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=266877 C2E46_RS01040 WP_000138507.1 170653..171585(+) (amiF) [Streptococcus agalactiae strain YZ1605]
ATGACTGAAAATCGAAAAAAATTAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGAGAAATTACCTTTAATGGAGAAGTGATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
GAAGATTCGTGATATCGTAGCAGAAGGTTTAGACATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCAATATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGGAAACTGTTAGAAGTTGGAACATCTGATGAT
GTTTATAACAATCCAATCCACCCTTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACACCTGGTCATT
TTGTTTTATCTACATCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.545	99.355	0.542
amiF	Streptococcus thermophilus LMG 18311	54.221	99.355	0.539
amiF	Streptococcus salivarius strain HSISS4	54.426	98.387	0.535