Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | RK88_RS00235 | Genome accession | NZ_CP026071 |
| Coordinates | 39433..39828 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932696.1 | Uniprot ID | A0A166JXQ7 |
| Organism | Staphylococcus aureus strain FDAARGOS_30 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 34433..44828
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK88_RS00200 (RK88_000200) | - | 35376..35780 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| RK88_RS00215 (RK88_000215) | - | 36659..36892 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| RK88_RS00220 (RK88_000220) | murA | 37003..38268 (+) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| RK88_RS00225 (RK88_000225) | fabZ | 38302..38742 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| RK88_RS00230 (RK88_000230) | - | 38799..39239 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| RK88_RS00235 (RK88_000235) | ssb | 39433..39828 (+) | 396 | WP_000932696.1 | single-stranded DNA-binding protein | Machinery gene |
| RK88_RS00240 (RK88_000240) | sceD | 40217..40912 (+) | 696 | WP_000752015.1 | lytic transglycosylase SceD | - |
| RK88_RS00250 (RK88_000250) | tenA | 41437..42126 (+) | 690 | WP_000396068.1 | thiaminase II | - |
| RK88_RS00255 (RK88_000255) | thiD | 42119..42949 (+) | 831 | WP_000594963.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RK88_RS00260 (RK88_000260) | thiM | 42933..43724 (+) | 792 | WP_001108496.1 | hydroxyethylthiazole kinase | - |
| RK88_RS00265 (RK88_000265) | thiE | 43726..44367 (+) | 642 | WP_000483150.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15070.11 Da Isoelectric Point: 5.6824
>NTDB_id=266542 RK88_RS00235 WP_000932696.1 39433..39828(+) (ssb) [Staphylococcus aureus strain FDAARGOS_30]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIERYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIERYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=266542 RK88_RS00235 WP_000932696.1 39433..39828(+) (ssb) [Staphylococcus aureus strain FDAARGOS_30]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAGATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAGATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |
| ssb | Staphylococcus aureus MW2 |
98.473 |
100 |
0.985 |