Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   RK78_RS02525 Genome accession   NZ_CP026066
Coordinates   468329..469216 (-) Length   295 a.a.
NCBI ID   WP_000143418.1    Uniprot ID   -
Organism   Staphylococcus aureus strain FDAARGOS_20     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 463329..474216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RK78_RS02490 (RK78_002490) - 463331..463423 (+) 93 WP_031774855.1 hypothetical protein -
  RK78_RS02495 (RK78_002495) - 463531..464028 (-) 498 WP_001065267.1 glutathione peroxidase -
  RK78_RS02500 (RK78_002500) - 464038..464298 (-) 261 WP_078068928.1 hypothetical protein -
  RK78_RS02510 (RK78_002510) - 464680..464793 (-) 114 WP_014937089.1 hypothetical protein -
  RK78_RS02515 (RK78_002515) - 465469..467469 (-) 2001 WP_031883335.1 ABC transporter permease -
  RK78_RS02520 (RK78_002520) - 467466..468221 (-) 756 WP_000923764.1 ABC transporter ATP-binding protein -
  RK78_RS02525 (RK78_002525) braS 468329..469216 (-) 888 WP_000143418.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  RK78_RS02530 (RK78_002530) braR 469227..469892 (-) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  RK78_RS02535 (RK78_002535) - 469918..470118 (-) 201 WP_000604727.1 hypothetical protein -
  RK78_RS02540 (RK78_002540) - 470316..471740 (+) 1425 WP_000953743.1 alkaline phosphatase -
  RK78_RS14650 (RK78_002545) - 471800..471901 (-) 102 WP_000731972.1 SE2200 family small protein -
  RK78_RS02550 (RK78_002550) - 472023..472478 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  RK78_RS02555 (RK78_002555) - 472723..473484 (-) 762 WP_000323448.1 alpha/beta hydrolase family protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34105.41 Da        Isoelectric Point: 5.8962

>NTDB_id=266331 RK78_RS02525 WP_000143418.1 468329..469216(-) (braS) [Staphylococcus aureus strain FDAARGOS_20]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQFNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=266331 RK78_RS02525 WP_000143418.1 468329..469216(-) (braS) [Staphylococcus aureus strain FDAARGOS_20]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAATTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATTCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99


Multiple sequence alignment