Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | RK77_RS13730 | Genome accession | NZ_CP026064 |
| Coordinates | 2669070..2669381 (+) | Length | 103 a.a. |
| NCBI ID | WP_000472256.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain FDAARGOS_19 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2664070..2674381
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK77_RS13700 (RK77_013700) | - | 2664853..2665056 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| RK77_RS13705 (RK77_013705) | - | 2665053..2666039 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| RK77_RS13710 (RK77_013710) | - | 2666039..2666368 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RK77_RS13715 (RK77_013715) | - | 2666365..2666988 (+) | 624 | WP_001223006.1 | MBL fold metallo-hydrolase | - |
| RK77_RS13720 (RK77_013720) | comGA | 2667040..2668014 (+) | 975 | WP_000697215.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RK77_RS13725 (RK77_013725) | comGB | 2667986..2669056 (+) | 1071 | WP_000776403.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RK77_RS13730 (RK77_013730) | comGC | 2669070..2669381 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RK77_RS13735 (RK77_013735) | comGD | 2669359..2669805 (+) | 447 | WP_075583651.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RK77_RS13740 (RK77_013740) | comGE | 2669792..2670091 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RK77_RS13745 (RK77_013745) | comGF | 2670009..2670506 (+) | 498 | WP_029697681.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RK77_RS13750 (RK77_013750) | - | 2670603..2670749 (+) | 147 | WP_078103567.1 | hypothetical protein | - |
| RK77_RS13755 (RK77_013755) | - | 2670739..2671263 (+) | 525 | WP_001015122.1 | shikimate kinase | - |
| RK77_RS13760 (RK77_013760) | gcvT | 2671422..2672513 (+) | 1092 | WP_000093355.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RK77_RS13765 (RK77_013765) | gcvPA | 2672533..2673879 (+) | 1347 | WP_000019688.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11315.36 Da Isoelectric Point: 8.5268
>NTDB_id=266326 RK77_RS13730 WP_000472256.1 2669070..2669381(+) (comGC) [Staphylococcus aureus strain FDAARGOS_19]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=266326 RK77_RS13730 WP_000472256.1 2669070..2669381(+) (comGC) [Staphylococcus aureus strain FDAARGOS_19]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| comGC | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae D39 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae R6 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus mitis SK321 |
51.163 |
83.495 |
0.427 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
51.163 |
83.495 |
0.427 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |