Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   DV947_RS05275 Genome accession   NZ_CP031545
Coordinates   983708..984190 (-) Length   160 a.a.
NCBI ID   WP_082308976.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ST109     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 978708..989190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV947_RS05255 (DV947_05260) pepT 979189..980412 (-) 1224 WP_116920249.1 peptidase T -
  DV947_RS05260 (DV947_05265) lepB 980620..981177 (-) 558 WP_116920250.1 signal peptidase I -
  DV947_RS05265 (DV947_05270) - 981300..982529 (-) 1230 WP_002953086.1 tetratricopeptide repeat protein -
  DV947_RS05270 (DV947_05275) - 982519..983697 (-) 1179 WP_116920251.1 AI-2E family transporter -
  DV947_RS05275 (DV947_05280) mutX 983708..984190 (-) 483 WP_082308976.1 8-oxo-dGTP diphosphatase Machinery gene
  DV947_RS05280 (DV947_05285) ftsX 984346..985275 (-) 930 WP_116920252.1 permease-like cell division protein FtsX -
  DV947_RS05285 (DV947_05290) ftsE 985268..985960 (-) 693 WP_002953094.1 cell division ATP-binding protein FtsE -
  DV947_RS05295 (DV947_05300) queG 987199..988317 (-) 1119 WP_011226076.1 tRNA epoxyqueuosine(34) reductase QueG -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18842.29 Da        Isoelectric Point: 4.6250

>NTDB_id=266170 DV947_RS05275 WP_082308976.1 983708..984190(-) (mutX) [Streptococcus thermophilus strain ST109]
MTKLATICYIDNGKELLLLHRNKKPNDVHEGKWISVGGKLEAGETPDECARREIFEETHLTVKKMDFKGMITFPEFTPGH
DWYTYVFKVTDFEGKLISDEESREGTLEWVPYDQVLTKQTWEGDYEIFKWILEDKPFFSAKFSYDCNQNLIDKTVTFYDT

Nucleotide


Download         Length: 483 bp        

>NTDB_id=266170 DV947_RS05275 WP_082308976.1 983708..984190(-) (mutX) [Streptococcus thermophilus strain ST109]
ATGACAAAGTTAGCTACCATTTGTTATATTGACAATGGGAAGGAGCTTTTGCTCCTACATCGTAATAAAAAGCCTAATGA
TGTTCATGAAGGAAAGTGGATTTCTGTCGGGGGAAAACTAGAAGCGGGAGAAACGCCTGACGAATGTGCTCGTCGTGAAA
TTTTCGAGGAAACTCATTTGACAGTGAAAAAGATGGACTTCAAAGGTATGATTACCTTCCCAGAATTTACTCCGGGCCAC
GATTGGTATACCTATGTCTTTAAGGTGACTGATTTTGAAGGAAAACTCATTTCTGATGAGGAATCTCGTGAAGGGACACT
TGAATGGGTACCATATGATCAGGTTTTAACTAAACAAACCTGGGAAGGTGACTATGAGATTTTTAAGTGGATTCTAGAAG
ATAAACCTTTCTTCTCTGCAAAATTTAGCTACGATTGTAACCAAAACTTGATAGATAAAACTGTAACATTTTATGATACA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

71.069

99.375

0.706