Detailed information NTG0265952

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: RK51_RS01035
• Genome accession: NZ_CP026041
• Coordinates: 207392..208399 (+)
• Length: 335 a.a.
• NCBI ID: WP_005481416.1
• Uniprot ID: A0A072GUT1
• Organism: Vibrio parahaemolyticus strain FDAARGOS_51
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 202392..213399

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RK51_RS01010 (RK51_001010)	rplC	202926..203555 (-)	630	WP_005456132.1	50S ribosomal protein L3	-
RK51_RS01015 (RK51_001015)	rpsJ	203570..203881 (-)	312	WP_004410492.1	30S ribosomal protein S10	-
RK51_RS01020 (RK51_001020)	rpmE	204339..204560 (-)	222	WP_005457203.1	50S ribosomal protein L31	-
RK51_RS01030 (RK51_001030)	priA	204855..207059 (+)	2205	WP_005496931.1	primosomal protein N'	-
RK51_RS01035 (RK51_001035)	cytR	207392..208399 (+)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
RK51_RS01040 (RK51_001040)	ftsN	208575..209120 (+)	546	WP_005496929.1	cell division protein FtsN	-
RK51_RS01045 (RK51_001045)	hslV	209284..209835 (+)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
RK51_RS01050 (RK51_001050)	hslU	209859..211190 (+)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
RK51_RS01055 (RK51_001055)	-	211375..212292 (+)	918	WP_005457195.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
RK51_RS01060 (RK51_001060)	rraA	212369..212881 (+)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
RK51_RS01065 (RK51_001065)	zapB	212986..213228 (-)	243	WP_005481417.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36835.35 Da
• Isoelectric Point: 6.4938

>NTDB_id=265952 RK51_RS01035 WP_005481416.1 207392..208399(+) (cytR) [Vibrio parahaemolyticus strain FDAARGOS_51]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKAVRKLLELPEPPTA
IFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPQRA

Nucleotide

• Length: 1008 bp

>NTDB_id=265952 RK51_RS01035 WP_005481416.1 207392..208399(+) (cytR) [Vibrio parahaemolyticus strain FDAARGOS_51]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTCGACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCCTTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATC
TACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCTGACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGT
ATCGAAGACGCAGCTATGGAACATGGCTACCTCGTACTACTCGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTT
TGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTACTGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAG
AACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTTGCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAAC
CTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACTTGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACAC
AGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAGCCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACA
GCGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCTGTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCG
ATTTTCTGCCACTGTGACACCATGGCAATCGGCGCAATCCAAGAAGCGAAACGACTCGGTCTGCGCGTTCCGCAAGATCT
GTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACTGCGATCCACCGTTAACAACCATTTCTCAACCTCGTTATG
AAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTCCTGAAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAA
ACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACGCGCCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A072GUT1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	99.701	0.904