Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   C2I05_RS18850 Genome accession   NZ_CP026039
Coordinates   3553297..3553881 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain PK1_2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3548297..3558881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2I05_RS18820 (C2I05_18795) dapD 3548484..3549194 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  C2I05_RS18825 (C2I05_18800) dapI 3549264..3550388 (+) 1125 WP_049139865.1 N-acetyldiaminopimelate deacetylase -
  C2I05_RS18830 (C2I05_18805) ykuS 3550450..3550695 (+) 246 WP_003232382.1 YkuS family protein -
  C2I05_RS18835 (C2I05_18810) mscT 3550732..3551535 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  C2I05_RS18840 (C2I05_18815) ahpA 3551772..3552314 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  C2I05_RS18845 (C2I05_18820) ykuV 3552385..3552831 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  C2I05_RS18850 (C2I05_18825) rok 3553297..3553881 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  C2I05_RS18855 (C2I05_18830) cse15 3553922..3554887 (-) 966 WP_032725607.1 spore protein Cse15 -
  C2I05_RS18860 (C2I05_18835) mobA 3555024..3555623 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  C2I05_RS18865 (C2I05_18840) moeB 3555674..3556693 (+) 1020 WP_014479671.1 molybdopterin-synthase adenylyltransferase MoeB -
  C2I05_RS18870 (C2I05_18845) glp 3556711..3558003 (+) 1293 WP_249848245.1 gephyrin-like molybdotransferase Glp -
  C2I05_RS18875 (C2I05_18850) mobB 3557964..3558485 (+) 522 WP_064671333.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=265889 C2I05_RS18850 WP_014113628.1 3553297..3553881(+) (rok) [Bacillus subtilis strain PK1_2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=265889 C2I05_RS18850 WP_014113628.1 3553297..3553881(+) (rok) [Bacillus subtilis strain PK1_2]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGAGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment