Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   C2I05_RS18750 Genome accession   NZ_CP026039
Coordinates   3537449..3537913 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain PK1_2     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3532449..3542913
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2I05_RS18730 (C2I05_18705) kinA 3532916..3534736 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  C2I05_RS18735 (C2I05_18710) dapX 3534746..3535927 (-) 1182 WP_120028042.1 aminotransferase A -
  C2I05_RS18740 (C2I05_18715) - 3536129..3536290 (-) 162 WP_014476654.1 hypothetical protein -
  C2I05_RS18745 (C2I05_18720) cheV 3536494..3537405 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  C2I05_RS18750 (C2I05_18725) kre 3537449..3537913 (-) 465 WP_003232406.1 YkyB family protein Regulator
  C2I05_RS18755 (C2I05_18730) ykuC 3538039..3539331 (-) 1293 WP_014479656.1 MFS transporter -
  C2I05_RS18760 (C2I05_18735) ltdD 3539407..3539901 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  C2I05_RS18765 (C2I05_18740) ppeE 3539958..3540818 (-) 861 WP_003232400.1 metallophosphoesterase -
  C2I05_RS18770 (C2I05_18745) fadH 3540961..3541725 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=265888 C2I05_RS18750 WP_003232406.1 3537449..3537913(-) (kre) [Bacillus subtilis strain PK1_2]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=265888 C2I05_RS18750 WP_003232406.1 3537449..3537913(-) (kre) [Bacillus subtilis strain PK1_2]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment