Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   C2I05_RS15710 Genome accession   NZ_CP026039
Coordinates   2981585..2982379 (+) Length   264 a.a.
NCBI ID   WP_021481166.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK1_2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2976585..2987379
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2I05_RS15680 (C2I05_15670) sxzA 2977425..2978456 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  C2I05_RS15685 (C2I05_15675) yfhB 2978571..2979452 (+) 882 WP_120027911.1 PhzF family phenazine biosynthesis isomerase -
  C2I05_RS15690 (C2I05_15680) yfhC 2979540..2980124 (+) 585 WP_003243940.1 nitroreductase -
  C2I05_RS15695 (C2I05_15685) yfhD 2980163..2980354 (-) 192 WP_003233561.1 YfhD family protein -
  C2I05_RS15700 (C2I05_15690) yfhE 2980420..2980530 (-) 111 WP_003223230.1 YfhE family protein -
  C2I05_RS15705 (C2I05_15695) yfhF 2980585..2981496 (-) 912 WP_103803364.1 TIGR01777 family oxidoreductase -
  C2I05_RS15710 (C2I05_15700) recX 2981585..2982379 (+) 795 WP_021481166.1 recombination regulator RecX Regulator
  C2I05_RS15715 (C2I05_15705) yfhH 2982381..2982695 (+) 315 WP_003244592.1 YfhH family protein -
  C2I05_RS15720 (C2I05_15710) yfhI 2982838..2984031 (+) 1194 WP_080474520.1 MFS transporter -
  C2I05_RS15725 (C2I05_15715) sspK 2984063..2984215 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  C2I05_RS15730 (C2I05_15720) yfhJ 2984340..2984609 (+) 270 WP_003243789.1 YfhJ family protein -
  C2I05_RS15735 (C2I05_15725) yfhK 2984754..2985272 (+) 519 WP_015252515.1 SH3 domain-containing protein -
  C2I05_RS15740 (C2I05_15730) spdL 2985357..2985689 (+) 333 WP_014479219.1 SdpC immunity protein SpdL -
  C2I05_RS15745 (C2I05_15735) ephM 2985676..2986536 (+) 861 WP_072173355.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31025.29 Da        Isoelectric Point: 6.6686

>NTDB_id=265871 C2I05_RS15710 WP_021481166.1 2981585..2982379(+) (recX) [Bacillus subtilis strain PK1_2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQIRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=265871 C2I05_RS15710 WP_021481166.1 2981585..2982379(+) (recX) [Bacillus subtilis strain PK1_2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGATAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment