Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | C2I05_RS08420 | Genome accession | NZ_CP026039 |
| Coordinates | 1576327..1576668 (-) | Length | 113 a.a. |
| NCBI ID | WP_014478203.1 | Uniprot ID | A0A0C3GLH9 |
| Organism | Bacillus subtilis strain PK1_2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1571327..1581668
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2I05_RS08405 (C2I05_08390) | hepA | 1571569..1574337 (+) | 2769 | WP_120027569.1 | DEAD/DEAH box helicase | - |
| C2I05_RS08410 (C2I05_08400) | ywpJ | 1574463..1575320 (-) | 858 | WP_072173789.1 | phosphatase YwpJ | - |
| C2I05_RS08415 (C2I05_08405) | glcR | 1575326..1576102 (-) | 777 | WP_003244075.1 | transcriptional regulator GlcR | - |
| C2I05_RS08420 (C2I05_08410) | ssbB | 1576327..1576668 (-) | 342 | WP_014478203.1 | single-stranded DNA-binding protein SsbB | Machinery gene |
| C2I05_RS08425 (C2I05_08415) | ywpG | 1576745..1577128 (-) | 384 | WP_003227796.1 | DynA interaction protein YwpG | - |
| C2I05_RS08430 (C2I05_08420) | ywpF | 1577303..1577713 (+) | 411 | WP_003227794.1 | YwpF-like family protein | - |
| C2I05_RS08435 (C2I05_08425) | - | 1577839..1578477 (-) | 639 | WP_167553950.1 | class A sortase | - |
Sequence
Protein
Download Length: 113 a.a. Molecular weight: 12462.11 Da Isoelectric Point: 7.8150
>NTDB_id=265850 C2I05_RS08420 WP_014478203.1 1576327..1576668(-) (ssbB) [Bacillus subtilis strain PK1_2]
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTR
SYENAEGVNVYVTEVLADTVRFMDPKPREKAAD
Nucleotide
Download Length: 342 bp
>NTDB_id=265850 C2I05_RS08420 WP_014478203.1 1576327..1576668(-) (ssbB) [Bacillus subtilis strain PK1_2]
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCTTCGCTACACTTCCGCCGGTGCGGCAGTTGC
ACATGTTACGCTCGCGGTGAACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAATTGCACACTTT
GGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAAAGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGA
AGCTATGAAAACGCGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTTCGTTTTATGGACCCTAAACC
CCGGGAAAAAGCTGCTGATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
99.115 |
100 |
0.991 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
93.805 |
0.602 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.434 |
93.805 |
0.558 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
45.37 |
95.575 |
0.434 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.444 |
95.575 |
0.425 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.519 |
95.575 |
0.416 |
| ssbB/cilA | Streptococcus mitis SK321 |
43.519 |
95.575 |
0.416 |
| ssbA | Streptococcus mutans UA159 |
44.34 |
93.805 |
0.416 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
41.905 |
92.92 |
0.389 |