Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | C2I05_RS02235 | Genome accession | NZ_CP026039 |
| Coordinates | 383972..385009 (-) | Length | 345 a.a. |
| NCBI ID | WP_070547532.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain PK1_2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 378972..390009
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2I05_RS02185 (C2I05_02160) | tasA | 379069..379854 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| C2I05_RS02190 (C2I05_02165) | sipW | 379919..380491 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| C2I05_RS02195 (C2I05_02170) | tapA | 380475..381236 (-) | 762 | WP_120028361.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C2I05_RS02200 (C2I05_02175) | yqzG | 381507..381833 (+) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| C2I05_RS02205 (C2I05_02180) | spoIIT | 381875..382054 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| C2I05_RS02210 (C2I05_02185) | comGG | 382126..382500 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| C2I05_RS02215 (C2I05_02190) | comGF | 382501..382884 (-) | 384 | WP_070547529.1 | ComG operon protein ComGF | Machinery gene |
| C2I05_RS02220 (C2I05_02195) | comGE | 382910..383257 (-) | 348 | WP_070547530.1 | ComG operon protein 5 | Machinery gene |
| C2I05_RS02225 (C2I05_02200) | comGD | 383241..383672 (-) | 432 | WP_120028362.1 | comG operon protein ComGD | Machinery gene |
| C2I05_RS02230 (C2I05_02205) | comGC | 383662..383958 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| C2I05_RS02235 (C2I05_02210) | comGB | 383972..385009 (-) | 1038 | WP_070547532.1 | comG operon protein ComGB | Machinery gene |
| C2I05_RS02240 (C2I05_02215) | comGA | 384996..386066 (-) | 1071 | WP_070547533.1 | competence protein ComGA | Machinery gene |
| C2I05_RS21445 (C2I05_02220) | - | 386277..386411 (-) | 135 | WP_257786427.1 | hypothetical protein | - |
| C2I05_RS02245 (C2I05_02225) | corA | 386477..387430 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| C2I05_RS02250 (C2I05_02230) | yqhB | 387573..388901 (+) | 1329 | WP_032726166.1 | hemolysin family protein | - |
| C2I05_RS02255 (C2I05_02235) | rsbRD | 388954..389790 (-) | 837 | WP_070547534.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39682.04 Da Isoelectric Point: 9.6257
>NTDB_id=265827 C2I05_RS02235 WP_070547532.1 383972..385009(-) (comGB) [Bacillus subtilis strain PK1_2]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSSARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSSARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=265827 C2I05_RS02235 WP_070547532.1 383972..385009(-) (comGB) [Bacillus subtilis strain PK1_2]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCATCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCATCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGTCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
98.452 |
93.623 |
0.922 |