Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   C2H97_RS15250 Genome accession   NZ_CP026038
Coordinates   2916731..2917684 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis PY79 strain PK1_3     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 2911731..2922684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H97_RS15225 (C2H97_15265) argF 2913562..2914521 (+) 960 WP_014476421.1 ornithine carbamoyltransferase -
  C2H97_RS15230 (C2H97_15270) yjzC 2914607..2914786 (+) 180 WP_003245356.1 YjzC family protein -
  C2H97_RS15235 (C2H97_15275) yjzD 2914833..2915018 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C2H97_RS15240 (C2H97_15280) - 2915267..2916001 (+) 735 WP_003245223.1 hypothetical protein -
  C2H97_RS15245 (C2H97_15285) - 2916083..2916640 (+) 558 WP_021479559.1 hypothetical protein -
  C2H97_RS15250 (C2H97_15290) med 2916731..2917684 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  C2H97_RS15255 (C2H97_15295) comZ 2917699..2917890 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C2H97_RS15260 (C2H97_15300) yjzB 2917920..2918156 (-) 237 WP_072173825.1 spore coat protein YjzB -
  C2H97_RS15265 (C2H97_15305) fabH 2918321..2919259 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C2H97_RS15270 (C2H97_15310) fabF 2919282..2920523 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C2H97_RS15275 (C2H97_15315) yjaZ 2920599..2921384 (+) 786 WP_213419345.1 DUF2268 domain-containing protein -
  C2H97_RS15280 (C2H97_15320) appD 2921575..2922561 (+) 987 WP_015383344.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=265798 C2H97_RS15250 WP_014476425.1 2916731..2917684(+) (med) [Bacillus subtilis PY79 strain PK1_3]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=265798 C2H97_RS15250 WP_014476425.1 2916731..2917684(+) (med) [Bacillus subtilis PY79 strain PK1_3]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGATGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAACAAAGG
CACCCTTGAGGGCGGCGACCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGGACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997


Multiple sequence alignment