Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   C2H97_RS10895 Genome accession   NZ_CP026038
Coordinates   2065628..2066026 (-) Length   132 a.a.
NCBI ID   WP_021481824.1    Uniprot ID   -
Organism   Bacillus subtilis PY79 strain PK1_3     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2060628..2071026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H97_RS10860 - 2061381..2061570 (+) 190 Protein_2093 hypothetical protein -
  C2H97_RS10865 (C2H97_10905) yckC 2061590..2062045 (+) 456 WP_014475763.1 RDD family protein -
  C2H97_RS10870 (C2H97_10910) yckD 2062128..2062460 (+) 333 WP_120027762.1 YckD family protein -
  C2H97_RS10875 (C2H97_10915) - 2062588..2063010 (+) 423 WP_170939093.1 MarR family transcriptional regulator -
  C2H97_RS10880 (C2H97_10920) - 2062998..2063339 (+) 342 WP_032724911.1 DUF3147 family protein -
  C2H97_RS10885 (C2H97_10925) - 2063358..2064086 (+) 729 WP_021481826.1 AAA family ATPase -
  C2H97_RS10890 (C2H97_10930) bglC 2064158..2065591 (+) 1434 WP_120027763.1 6-phospho-beta-glucosidase -
  C2H97_RS10895 (C2H97_10935) nin/comJ 2065628..2066026 (-) 399 WP_021481824.1 DNA-entry nuclease inhibitor Regulator
  C2H97_RS10900 (C2H97_10940) nucA/comI 2066053..2066502 (-) 450 WP_038828489.1 DNA-entry nuclease Machinery gene
  C2H97_RS10905 (C2H97_10945) tlpC 2066670..2068391 (-) 1722 WP_120027764.1 methyl-accepting chemotaxis protein TlpC -
  C2H97_RS10910 (C2H97_10950) hxlB 2068501..2069058 (-) 558 WP_021481820.1 6-phospho-3-hexuloisomerase -
  C2H97_RS10915 (C2H97_10955) hxlA 2069064..2069696 (-) 633 WP_032724921.1 3-hexulose-6-phosphate synthase -
  C2H97_RS10920 (C2H97_10960) hxlR 2069928..2070290 (+) 363 WP_003246265.1 transcriptional activator HxlR -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 14962.93 Da        Isoelectric Point: 4.8991

>NTDB_id=265783 C2H97_RS10895 WP_021481824.1 2065628..2066026(-) (nin/comJ) [Bacillus subtilis PY79 strain PK1_3]
MIKSWKPQELSISYHQFTVFQKDSTPPVMDWTDEAIEKGYAAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=265783 C2H97_RS10895 WP_021481824.1 2065628..2066026(-) (nin/comJ) [Bacillus subtilis PY79 strain PK1_3]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TGTAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATGCTGCGGCAGACGGAGCCATTTCCTTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATCATGTCTAAAAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992


Multiple sequence alignment