Detailed information NTG0265777

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: C2H97_RS08955
• Genome accession: NZ_CP026038
• Coordinates: 1704241..1705353 (+)
• Length: 370 a.a.
• NCBI ID: WP_015715082.1
• Uniprot ID: A0A8E0S8Z1
• Organism: Bacillus subtilis PY79 strain PK1_3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1699241..1710353

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2H97_RS08930 (C2H97_08945)	rnpA	1699951..1700301 (-)	351	WP_120027688.1	ribonuclease P protein component	-
C2H97_RS08935 (C2H97_08950)	rpmH	1700453..1700587 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
C2H97_RS08940 (C2H97_08955)	dnaA	1701214..1702554 (+)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
C2H97_RS08945 (C2H97_08960)	dnaN	1702743..1703879 (+)	1137	WP_003242509.1	DNA polymerase III subunit beta	-
C2H97_RS08950 (C2H97_08965)	rlbA	1704010..1704225 (+)	216	WP_003226810.1	ribosome maturation protein RlbA	-
C2H97_RS08955 (C2H97_08970)	recF	1704241..1705353 (+)	1113	WP_015715082.1	DNA replication/repair protein RecF	Machinery gene
C2H97_RS08960 (C2H97_08975)	remB	1705371..1705616 (+)	246	WP_003219266.1	extracellular matrix regulator RemB	-
C2H97_RS08965 (C2H97_08980)	gyrB	1705671..1707587 (+)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
C2H97_RS08970 (C2H97_08985)	gyrA	1707798..1710263 (+)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42318.37 Da
• Isoelectric Point: 7.3661

>NTDB_id=265777 C2H97_RS08955 WP_015715082.1 1704241..1705353(+) (recF) [Bacillus subtilis PY79 strain PK1_3]
MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLELSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=265777 C2H97_RS08955 WP_015715082.1 1704241..1705353(+) (recF) [Bacillus subtilis PY79 strain PK1_3]
TTGTATATCCAGAACTTAGAACTGACATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATCGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTGTAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTGACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGAGTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTGCAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.73	100	0.997