Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   C2H95_RS15335 Genome accession   NZ_CP026037
Coordinates   2999128..2999931 (-) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_17     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2994128..3004931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H95_RS15310 (C2H95_15245) glpQ 2995274..2996005 (-) 732 WP_041850009.1 glycerophosphodiester phosphodiesterase -
  C2H95_RS15315 (C2H95_15250) yqiI 2996084..2996704 (-) 621 WP_103803305.1 N-acetylmuramoyl-L-alanine amidase -
  C2H95_RS15320 (C2H95_15255) yqiH 2996719..2997012 (-) 294 WP_003230284.1 lipoprotein -
  C2H95_RS15325 - 2997320..2997472 (+) 153 WP_014480226.1 hypothetical protein -
  C2H95_RS15330 (C2H95_15260) yqiG 2997545..2998663 (+) 1119 WP_032726120.1 NADH-dependent flavin oxidoreductase -
  C2H95_RS15335 (C2H95_15265) spo0A 2999128..2999931 (-) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  C2H95_RS15340 (C2H95_15270) spoIVB 3000207..3001487 (-) 1281 WP_103803304.1 SpoIVB peptidase -
  C2H95_RS15345 (C2H95_15275) recN 3001662..3003392 (-) 1731 WP_038829742.1 DNA repair protein RecN Machinery gene
  C2H95_RS15350 (C2H95_15280) argR 3003425..3003874 (-) 450 WP_021480005.1 arginine repressor ArgR -
  C2H95_RS15355 (C2H95_15285) yqxC 3003972..3004817 (-) 846 WP_003230264.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=265711 C2H95_RS15335 WP_003226427.1 2999128..2999931(-) (spo0A) [Bacillus subtilis strain PK5_17]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=265711 C2H95_RS15335 WP_003226427.1 2999128..2999931(-) (spo0A) [Bacillus subtilis strain PK5_17]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTAAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATTATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGTTGTTTGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAATTCGGAATTCATTGCAATGGTTGCGGATAAGCTGAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment