Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   C2H95_RS10690 Genome accession   NZ_CP026037
Coordinates   2057680..2058144 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain PK5_17     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2052680..2063144
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H95_RS10670 (C2H95_10635) kinA 2053147..2054967 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  C2H95_RS10675 (C2H95_10640) dapX 2054977..2056158 (-) 1182 WP_021479391.1 aminotransferase A -
  C2H95_RS10680 (C2H95_10645) - 2056360..2056521 (-) 162 WP_014476654.1 hypothetical protein -
  C2H95_RS10685 (C2H95_10650) cheV 2056725..2057636 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  C2H95_RS10690 (C2H95_10655) kre 2057680..2058144 (-) 465 WP_003232406.1 YkyB family protein Regulator
  C2H95_RS10695 (C2H95_10660) ykuC 2058270..2059562 (-) 1293 WP_014479656.1 MFS transporter -
  C2H95_RS10700 (C2H95_10665) ltdD 2059638..2060132 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  C2H95_RS10705 (C2H95_10670) ppeE 2060189..2061049 (-) 861 WP_041850886.1 metallophosphoesterase -
  C2H95_RS10710 (C2H95_10675) fadH 2061192..2061956 (+) 765 WP_041850885.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=265702 C2H95_RS10690 WP_003232406.1 2057680..2058144(-) (kre) [Bacillus subtilis strain PK5_17]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=265702 C2H95_RS10690 WP_003232406.1 2057680..2058144(-) (kre) [Bacillus subtilis strain PK5_17]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment