Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   C2H95_RS09325 Genome accession   NZ_CP026037
Coordinates   1811012..1812133 (+) Length   373 a.a.
NCBI ID   WP_237984014.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_17     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1806012..1817133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H95_RS09290 (C2H95_09260) yjbB 1806651..1807868 (+) 1218 WP_072175656.1 MFS transporter -
  C2H95_RS09295 (C2H95_09265) yjbC 1808032..1808610 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  C2H95_RS09300 (C2H95_09270) spx 1808791..1809186 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  C2H95_RS09305 (C2H95_09275) yjbE 1809232..1809888 (-) 657 WP_038828809.1 TerC family protein -
  C2H95_RS09310 - 1810058..1810198 (+) 141 WP_119122854.1 hypothetical protein -
  C2H95_RS09315 (C2H95_09280) mecA 1810165..1810821 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  C2H95_RS09320 - 1810816..1810938 (-) 123 WP_124059721.1 hypothetical protein -
  C2H95_RS09325 (C2H95_09285) coiA 1811012..1812133 (+) 1122 WP_237984014.1 competence protein CoiA Machinery gene
  C2H95_RS09330 (C2H95_09290) pepF 1812363..1814192 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  C2H95_RS09335 (C2H95_09295) - 1814230..1814397 (-) 168 WP_003244944.1 hypothetical protein -
  C2H95_RS09340 (C2H95_09305) spxH 1814711..1815610 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  C2H95_RS09345 (C2H95_09310) yjbI 1815607..1816005 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  C2H95_RS09350 (C2H95_09315) cwlQ 1816260..1816994 (-) 735 WP_249848280.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43805.87 Da        Isoelectric Point: 10.0622

>NTDB_id=265698 C2H95_RS09325 WP_237984014.1 1811012..1812133(+) (coiA) [Bacillus subtilis strain PK5_17]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKEINRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRFECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=265698 C2H95_RS09325 WP_237984014.1 1811012..1812133(+) (coiA) [Bacillus subtilis strain PK5_17]
CTGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCTCCATAGACATCGAACCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACACAACGGGCTTCGCCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGGATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAATAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTTTGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

100

0.987


Multiple sequence alignment